RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424	PRR14L	Q5THK1	2151 aa		12.02	□□□□□ -0.48
UBA3-210	ENST00000485424	PLOD3	O60568	738 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	TSPAN2	O60636	221 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	SLITRK5	O94991	958 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	RCBTB2	O95199	551 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	GOSR1	O95249	250 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	RAF1	P04049	648 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	CT45A8	P0DMV1	189 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	CT45A9	P0DMV2	189 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	FOSL1	P15407	271 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	DDC	P20711	480 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	DPP4	P27487	766 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	CPOX	P36551	454 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	RFX3	P48380	749 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	STAR	P49675	285 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	PSMD4	P55036	377 aa	Known RBP	12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	DSCR4	P56555	118 aa	Predicted RBP	12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	SLC29A2	Q14542	456 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	DAZAP2	Q15038	168 aa	Predicted RBP	12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	DECR1	Q16698	335 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	CT45A2	Q5DJT8	189 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	CAMKMT	Q7Z624	323 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	GCNT2	Q8N0V5	402 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	OR7G2	Q8NG99	324 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	VSTM2L	Q96N03	204 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	RHOXF2	Q9BQY4	288 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	PIGM	Q9H3S5	423 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	PTGES2	Q9H7Z7	377 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	C3orf14	Q9HBI5	128 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424		Q9N2J8	555 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	DDX18	Q9NVP1	670 aa	Known RBP	12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	NDRG3	Q9UGV2	375 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	FBXL2	Q9UKC9	423 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	GRID1	Q9ULK0	1009 aa		12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	MRPS18C	Q9Y3D5	142 aa	Known RBP	12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	POLR3H	Q9Y535	204 aa	Predicted RBP	12.02	□□□□□ -0.49
UBA3-210	ENST00000485424	SERTM1	A2A2V5	107 aa		12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	PLOD2	O00469	737 aa		12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	NME6	O75414	186 aa	Predicted RBP	12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	PEPD	P12955	493 aa		12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	HK1	P19367	917 aa		12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	EVI2B	P34910	448 aa		12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	GPC1	P35052	558 aa		12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	SLCO1A2	P46721	670 aa		12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	CCT5	P48643	541 aa		12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	GFRA1	P56159	465 aa		12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	EEFSEC	P57772	596 aa	Known RBP	12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	STX5	Q13190	355 aa		12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	CCDC153	Q494R4	210 aa		12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	RAET1L	Q5VY80	246 aa		12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	OR2A2	Q6IF42	318 aa		12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	GALNT18	Q6P9A2	607 aa		12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	TMEM107	Q6UX40	140 aa		12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	UBQLNL	Q8IYU4	475 aa		12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	MEIOB	Q8N635	442 aa		12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	WFDC11	Q8NEX6	87 aa		12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	UBLCP1	Q8WVY7	318 aa	Predicted RBP	12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	NTNG2	Q96CW9	530 aa		12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	IQCG	Q9H095	443 aa	Known RBP	12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	GSTO2	Q9H4Y5	243 aa		12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	GALNT8	Q9NY28	637 aa		12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	EIF3L	Q9Y262	564 aa	Known RBP	12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	CHD3	Q12873	2000 aa	Known RBP	12.01	□□□□□ -0.49
UBA3-210	ENST00000485424	NUP214	P35658	2090 aa	Predicted RBP	12.01	□□□□□ -0.49
UBA3-210	ENST00000485424		A0A087WV62	115 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	SH3D21	A4FU49	640 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	SMNDC1	O75940	238 aa	Known RBP eCLIP	12	□□□□□ -0.49
UBA3-210	ENST00000485424	SOX18	P35713	384 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	MC3R	P41968	323 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	LHX2	P50458	406 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	FOXF2	Q12947	444 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	GANAB	Q14697	944 aa	Known RBP	12	□□□□□ -0.49
UBA3-210	ENST00000485424	DEFB113	Q30KQ7	82 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	CYP27C1	Q4G0S4	372 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	NPSR1	Q6W5P4	371 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	ZYG11A	Q6WRX3	759 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	SZRD1	Q7Z422	152 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	CNEP1R1	Q8N9A8	125 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	OR4N2	Q8NGD1	307 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	FAM76A	Q8TAV0	307 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	UCN2	Q96RP3	112 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	TBL1XR1	Q9BZK7	514 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	DSN1	Q9H410	356 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	PLEKHF2	Q9H8W4	249 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	MYNN	Q9NPC7	610 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	SIRT5	Q9NXA8	310 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	JKAMP	Q9P055	326 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	CLCF1	Q9UBD9	225 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	MID2	Q9UJV3	735 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	PACSIN3	Q9UKS6	424 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	ABCG2	Q9UNQ0	655 aa		12	□□□□□ -0.49
UBA3-210	ENST00000485424	WBP11	Q9Y2W2	641 aa	Known RBP	12	□□□□□ -0.49
UBA3-210	ENST00000485424	CR1	P17927	2039 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424		A0A1W2PPM1	405 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	SLC22A20	A6NK97	555 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	SMIM23	A6NLE4	172 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	MYO1G	B0I1T2	1018 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424		H3BML4	177 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	SLC28A1	O00337	649 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	RGS14	O43566	566 aa		11.99	□□□□□ -0.49

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