RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 RNF112Q9ULX5 631 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 MAGED1Q9Y5V3 778 aaPredicted RBP10.03□□□□□ -0.8
DDX56-212ENST00000485367 SHANK1Q9Y566 2161 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 KCNE1BA0A087WTH5 132 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 ELOVL7A1L3X0 281 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 EFCAB9A8MZ26 197 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 IDSB3KWA1 339 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 SUPT3HB4E1H0 165 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 PPP6CO00743 305 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 HEXBP07686 556 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 PCNAP12004 261 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 NPPBP16860 134 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 EFNA1P20827 205 aaPredicted RBP10.03□□□□□ -0.8
DDX56-212ENST00000485367 GNLYP22749 145 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 CXCR2P25025 360 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 PSMB9P28065 219 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 RCVRNP35243 200 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 ETV6P41212 452 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 UQCRFS1P47985 274 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 AP1S2P56377 157 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 PIGFQ07326 219 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 FAM53BQ14153 422 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 SYT16Q17RD7 645 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 AGAP6Q5VW22 663 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 STEAP3Q658P3 488 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 IGFL3Q6UXB1 125 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 RFPL4BQ6ZWI9 263 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 SNX29P2Q8IUI4 249 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 ARHGEF39Q8N4T4 335 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 FNDC5Q8NAU1 212 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 GLB1L3Q8NCI6 653 aaPredicted RBP10.03□□□□□ -0.8
DDX56-212ENST00000485367 GALNT11Q8NCW6 608 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 SIMC1Q8NDZ2 872 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 OR9A4Q8NGU2 314 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 EXT2Q93063 718 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 SLC38A4Q969I6 547 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 THOC3Q96J01 351 aaKnown RBP10.03□□□□□ -0.8
DDX56-212ENST00000485367 NSUN5Q96P11 429 aaKnown RBP10.03□□□□□ -0.8
DDX56-212ENST00000485367 AGAP4Q96P64 663 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 ZNF382Q96SR6 550 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 ZNF160Q9HCG1 818 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 MKKSQ9NPJ1 570 aaPredicted RBP10.03□□□□□ -0.8
DDX56-212ENST00000485367 ABCB10Q9NRK6 738 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 DCAF13Q9NV06 445 aaKnown RBP10.03□□□□□ -0.8
DDX56-212ENST00000485367 C14orf105Q9NVL8 296 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 SLAMF8Q9P0V8 285 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 ERVK-18Q9QC07 812 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 TMEFF2Q9UIK5 374 aaPredicted RBP10.03□□□□□ -0.8
DDX56-212ENST00000485367 ZNF221Q9UK13 617 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 USP22Q9UPT9 525 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 GRIP1Q9Y3R0 1128 aa10.03□□□□□ -0.8
DDX56-212ENST00000485367 KCNK2O95069 426 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 HPP00738 406 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 TRAPPC2P0DI81 140 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 TRAPPC2BP0DI82 140 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 PCSK2P16519 638 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 IGFBP5P24593 272 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 BCL6P41182 706 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 CCR8P51685 355 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 ARHGDIAP52565 204 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 NCS1P62166 190 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 SNRPNP63162 240 aaKnown RBP10.02□□□□□ -0.81
DDX56-212ENST00000485367 EEF1A2Q05639 463 aaKnown RBP10.02□□□□□ -0.81
DDX56-212ENST00000485367 Q0VFX4 171 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 ESPL1Q14674 2120 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 ZXDCQ2QGD7 858 aaPredicted RBP10.02□□□□□ -0.81
DDX56-212ENST00000485367 CDONQ4KMG0 1287 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 CATSPEREQ5SY80 951 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 CCNJQ5T5M9 372 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 TMEM236Q5W0B7 351 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 ATG9BQ674R7 924 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 RNF165Q6ZSG1 346 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 GPRIN3Q6ZVF9 776 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 NDUFAF7Q7L592 441 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 ASPGQ86U10 573 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 TSPYL5Q86VY4 417 aaPredicted RBP10.02□□□□□ -0.81
DDX56-212ENST00000485367 NKAPQ8N5F7 415 aaKnown RBP10.02□□□□□ -0.81
DDX56-212ENST00000485367 CAMKVQ8NCB2 501 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 KBTBD8Q8NFY9 601 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 OR56A3Q8NH54 315 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 ZCCHC10Q8TBK6 192 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 FIG4Q92562 907 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 HTRA1Q92743 480 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 TP53INP1Q96A56 240 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 PDLIM5Q96HC4 596 aaKnown RBP10.02□□□□□ -0.81
DDX56-212ENST00000485367 ZBTB18Q99592 522 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 ITPAQ9BY32 194 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 DCSTAMPQ9H295 470 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 MARCH7Q9H992 704 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 SEMA4BQ9NPR2 832 aaPredicted RBP10.02□□□□□ -0.81
DDX56-212ENST00000485367 OPTCQ9UBM4 332 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 PCTPQ9UKL6 214 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 PEX16Q9Y5Y5 336 aa10.02□□□□□ -0.81
DDX56-212ENST00000485367 USP9XQ93008 2570 aaPredicted RBP10.02□□□□□ -0.81
DDX56-212ENST00000485367 NSG1A0A0A6YYJ2 146 aa10.01□□□□□ -0.81
DDX56-212ENST00000485367 NPEPPSL1A6NEC2 478 aa10.01□□□□□ -0.81
DDX56-212ENST00000485367 FAM220BPB1ANY3 271 aa10.01□□□□□ -0.81
DDX56-212ENST00000485367 LOC110117498-PIK3R3F6TDL0 507 aa10.01□□□□□ -0.81
DDX56-212ENST00000485367 SGK494L7N484 410 aa10.01□□□□□ -0.81
DDX56-212ENST00000485367 CDC7O00311 574 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms