RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 G6PC3Q9BUM1 346 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 SFXN3Q9BWM7 321 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 ACBD3Q9H3P7 528 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 LIME1Q9H400 295 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 DSN1Q9H410 356 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 SDHAF3Q9NRP4 125 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 CCM2LQ9NUG4 571 aaPredicted RBP8.55□□□□□ -1.04
NUP50-215ENST00000484186 DDX18Q9NVP1 670 aaKnown RBP8.55□□□□□ -1.04
NUP50-215ENST00000484186 PPP4R1LQ9P1A2 415 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 CLCF1Q9UBD9 225 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 ST6GALNAC2Q9UJ37 374 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 DKKL1Q9UK85 242 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 MRTO4Q9UKD2 239 aaKnown RBP8.55□□□□□ -1.04
NUP50-215ENST00000484186 EDARQ9UNE0 448 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 RPH3AQ9Y2J0 694 aaPredicted RBP8.55□□□□□ -1.04
NUP50-215ENST00000484186 CCL27Q9Y4X3 112 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 ANKRD17O75179 2603 aaKnown RBP8.55□□□□□ -1.04
NUP50-215ENST00000484186 MED12Q93074 2177 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 TTC36A6NLP5 189 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 C17orf51A8MQB3 221 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 B4DXG7 233 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 AZIN1O14977 448 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 RGS14O43566 566 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 SCO2O43819 266 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 IL33O95760 270 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 IFI6P09912 130 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 PEPDP12955 493 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 KRT4P19013 534 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 TCEA1P23193 301 aaKnown RBP8.54□□□□□ -1.04
NUP50-215ENST00000484186 CLK3P49761 638 aaKnown RBP8.54□□□□□ -1.04
NUP50-215ENST00000484186 PSMD4P55036 377 aaKnown RBP8.54□□□□□ -1.04
NUP50-215ENST00000484186 RIPPLY3P57055 190 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 B3GALT5-AS1P59052 145 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 EEF1A1P68104 462 aaKnown RBP8.54□□□□□ -1.04
NUP50-215ENST00000484186 EEF1A1P5Q5VTE0 462 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 CLEC6AQ6EIG7 209 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 PLXDC2Q6UX71 529 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 Q6ZSR9 355 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 CHMP1BQ7LBR1 199 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 CDC20BQ86Y33 519 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 C10orf107Q8IVU9 208 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 C4orf33Q8N1A6 199 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 FADS6Q8N9I5 356 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 OR2M3Q8NG83 312 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 EPS8L3Q8TE67 593 aaKnown RBP8.54□□□□□ -1.04
NUP50-215ENST00000484186 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.54□□□□□ -1.04
NUP50-215ENST00000484186 GFM2Q969S9 779 aaKnown RBP8.54□□□□□ -1.04
NUP50-215ENST00000484186 RMND5BQ96G75 393 aaPredicted RBP8.54□□□□□ -1.04
NUP50-215ENST00000484186 FOXC2Q99958 501 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 LMF2Q9BU23 707 aaKnown RBP8.54□□□□□ -1.04
NUP50-215ENST00000484186 GATA5Q9BWX5 397 aaPredicted RBP8.54□□□□□ -1.04
NUP50-215ENST00000484186 RBM24Q9BX46 236 aaKnown RBP8.54□□□□□ -1.04
NUP50-215ENST00000484186 CXXC4Q9H2H0 198 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 PIGMQ9H3S5 423 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 C3orf14Q9HBI5 128 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 LRTM1Q9HBL6 345 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 Q9N2J8 555 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 C1orf109Q9NX04 203 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 FLRT3Q9NZU0 649 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 MED11Q9P086 117 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 MID2Q9UJV3 735 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 ABCG2Q9UNQ0 655 aa8.54□□□□□ -1.04
NUP50-215ENST00000484186 HIVEP1P15822 2718 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 DOCK7Q96N67 2140 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 TLDC2A0PJX2 215 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 LINC01387J3KSC0 135 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 PDPK1O15530 556 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 HCRTR2O43614 444 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 TBX19O60806 448 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 TRIM13O60858 407 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 TGM6O95932 706 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 PRPS2P11908 318 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 HK1P19367 917 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 DNASE1P24855 282 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 GABRA3P34903 492 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 CPA2P48052 419 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 DIO3P55073 304 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 GANABQ14697 944 aaKnown RBP8.53□□□□□ -1.04
NUP50-215ENST00000484186 PCLAFQ15004 111 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 FBXW10Q5XX13 1052 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 RNF165Q6ZSG1 346 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 ZNF551Q7Z340 670 aaPredicted RBP8.53□□□□□ -1.04
NUP50-215ENST00000484186 P4HA3Q7Z4N8 544 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 LUZP2Q86TE4 346 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 MARCH3Q86UD3 253 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 GRAMD2AQ8IUY3 354 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 HOMEZQ8IX15 550 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 MEIOBQ8N635 442 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 CEP70Q8NHQ1 597 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 DUSP19Q8WTR2 217 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 ZNF764Q96H86 408 aaPredicted RBP8.53□□□□□ -1.04
NUP50-215ENST00000484186 FCRL1Q96LA6 429 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 TRMOQ9BU70 441 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 RTN4RQ9BZR6 473 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 IQCGQ9H095 443 aaKnown RBP8.53□□□□□ -1.04
NUP50-215ENST00000484186 TUBB1Q9H4B7 451 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 REEP4Q9H6H4 257 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 PTGES2Q9H7Z7 377 aa8.53□□□□□ -1.04
NUP50-215ENST00000484186 FAM120CQ9NX05 1096 aaKnown RBP8.53□□□□□ -1.04
NUP50-215ENST00000484186 FIS1Q9Y3D6 152 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms