RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 FCMRO60667 390 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 TPST2O60704 377 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 UFL1O94874 794 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 NPPAP01160 153 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 EPOP01588 193 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 CA3P07451 260 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 CHRNGP07510 517 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 MELTFP08582 738 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 HOXD4P09016 255 aaPredicted RBP2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 ALPIP09923 528 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 PNMTP11086 282 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 PPP2R1AP30153 589 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 CA8P35219 290 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 TSFMP43897 325 aaKnown RBP2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 CDKN1BP46527 198 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 GEMP55040 296 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 HERV-K104P63124 156 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 HERVK_113P63132 956 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 ERVK-8P63133 956 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 NUCB2P80303 420 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 FUT7Q11130 342 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 TRAP1Q12931 704 aaKnown RBP2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 TRIP10Q15642 601 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 ZNF74Q16587 644 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 PCK2Q16822 640 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 ZSWIM7Q19AV6 140 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 HKDC1Q2TB90 917 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 GPAT3Q53EU6 434 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 AGKQ53H12 422 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 SLC35D3Q5M8T2 416 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 RABGAP1LQ5R372 815 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 TAF3Q5VWG9 929 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 RAET1LQ5VY80 246 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 TTC19Q6DKK2 380 aaPredicted RBP2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 TTC27Q6P3X3 843 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 SLC39A4Q6P5W5 647 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 CTR9Q6PD62 1173 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 WASH2PQ6VEQ5 465 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 SYT10Q6XYQ8 523 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 FRRS1Q6ZNA5 592 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 GCNT7Q6ZNI0 430 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 GDPGP1Q6ZNW5 385 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 G2E3Q7L622 706 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 GOLGA7Q7Z5G4 137 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 ADGRD2Q7Z7M1 963 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 PRUNE1Q86TP1 453 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 KRTAP11-1Q8IUC1 163 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 TDHQ8IZJ6 230 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 SLC34A3Q8N130 599 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 METTL4Q8N3J2 472 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 OR6M1Q8NGM8 313 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 OR8J1Q8NGP2 316 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 SPRYD4Q8WW59 207 aaPredicted RBP2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 TCP11Q8WWU5 503 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 TSACCQ96A04 125 aaPredicted RBP2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 CIDECQ96AQ7 238 aaPredicted RBP2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 ATXN7L3BQ96GX2 97 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 ZBED3Q96IU2 234 aaPredicted RBP2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 C7orf34Q96L11 122 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 IFT74Q96LB3 600 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 C12orf66Q96MD2 445 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 S1PR3Q99500 378 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 NKX3-1Q99801 234 aaPredicted RBP2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 NDUFAF3Q9BU61 184 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 NUP58Q9BVL2 599 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 ERVK-6Q9BXR3 956 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 POLR3FQ9H1D9 316 aaPredicted RBP2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 RIMS4Q9H426 269 aaPredicted RBP2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 DPEP3Q9H4B8 488 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 RNF121Q9H920 327 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 B3GAT2Q9NPZ5 323 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 SLC2A8Q9NY64 477 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 RDH8Q9NYR8 311 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 CTSZQ9UBR2 303 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 RPH3ALQ9UNE2 315 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 B9D1Q9UPM9 204 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 NIP7Q9Y221 180 aaKnown RBP eCLIP2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 RNF6Q9Y252 685 aa2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 CENPJQ9HC77 1338 aaPredicted RBP2.42□□□□□ -2.02
LAPTM4A-202ENST00000483117 ARID2Q68CP9 1835 aa2.41□□□□□ -2.02
LAPTM4A-202ENST00000483117 A0A087WUV0 522 aaPredicted RBP2.41□□□□□ -2.02
LAPTM4A-202ENST00000483117 PPIAL4CA0A0B4J2A2 164 aa2.41□□□□□ -2.02
LAPTM4A-202ENST00000483117 A0A0J9YYE9 177 aa2.41□□□□□ -2.02
LAPTM4A-202ENST00000483117 ESYT2A0FGR8 921 aa2.41□□□□□ -2.02
LAPTM4A-202ENST00000483117 MEI4A8MW99 385 aa2.41□□□□□ -2.02
LAPTM4A-202ENST00000483117 C17orf105B2RV13 164 aa2.41□□□□□ -2.02
LAPTM4A-202ENST00000483117 SHISA9B4DS77 424 aa2.41□□□□□ -2.02
LAPTM4A-202ENST00000483117 CCSO14618 274 aa2.41□□□□□ -2.02
LAPTM4A-202ENST00000483117 NVLO15381 856 aaKnown RBP2.41□□□□□ -2.02
LAPTM4A-202ENST00000483117 JAK2O60674 1132 aa2.41□□□□□ -2.02
LAPTM4A-202ENST00000483117 CDH16O75309 829 aa2.41□□□□□ -2.02
LAPTM4A-202ENST00000483117 LGI1O95970 557 aa2.41□□□□□ -2.02
LAPTM4A-202ENST00000483117 TRBC1P01850 177 aa2.41□□□□□ -2.02
LAPTM4A-202ENST00000483117 CHRNA1P02708 482 aa2.41□□□□□ -2.02
LAPTM4A-202ENST00000483117 PLEKP08567 350 aaPredicted RBP2.41□□□□□ -2.02
LAPTM4A-202ENST00000483117 NUDT17P0C025 328 aa2.41□□□□□ -2.02
LAPTM4A-202ENST00000483117 PPIAL4GP0DN37 164 aa2.41□□□□□ -2.02
LAPTM4A-202ENST00000483117 MSR1P21757 451 aa2.41□□□□□ -2.02
LAPTM4A-202ENST00000483117 CPN2P22792 545 aa2.41□□□□□ -2.02
LAPTM4A-202ENST00000483117 CTNNA2P26232 953 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms