RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 TBC1D24Q9ULP9 559 aa10.66□□□□□ -0.7
SMPD4-218ENST00000482171 RHCEP18577 417 aa10.66□□□□□ -0.7
SMPD4-218ENST00000482171 HTRA4P83105 476 aaPredicted RBP10.66□□□□□ -0.7
SMPD4-218ENST00000482171 PRPF38BQ5VTL8 546 aaKnown RBP10.66□□□□□ -0.7
SMPD4-218ENST00000482171 FAM160A2Q8N612 972 aaPredicted RBP10.66□□□□□ -0.7
SMPD4-218ENST00000482171 OR1E3Q8WZA6 343 aa10.66□□□□□ -0.7
SMPD4-218ENST00000482171 ZDHHC12Q96GR4 267 aa10.66□□□□□ -0.7
SMPD4-218ENST00000482171 TIMM29Q9BSF4 260 aa10.66□□□□□ -0.7
SMPD4-218ENST00000482171 CENPOQ9BU64 300 aa10.66□□□□□ -0.7
SMPD4-218ENST00000482171 ZDHHC5Q9C0B5 715 aa10.66□□□□□ -0.7
SMPD4-218ENST00000482171 AMBRA1Q9C0C7 1298 aa10.66□□□□□ -0.7
SMPD4-218ENST00000482171 OR6C2Q9NZP2 312 aa10.66□□□□□ -0.7
SMPD4-218ENST00000482171 ZFR2Q9UPR6 939 aaKnown RBP10.66□□□□□ -0.7
SMPD4-218ENST00000482171 MGAT4BQ9UQ53 548 aa10.66□□□□□ -0.7
SMPD4-218ENST00000482171 MAB21L2Q9Y586 359 aa10.66□□□□□ -0.7
SMPD4-218ENST00000482171 FXYD6-FXYD2A0A087WZ82 144 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 TRBV5-4A0A0C4DH59 114 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 C2orf92A0A1B0GVN3 265 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 GFYI3L273 518 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 J3KTA2 159 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 CLEC3AO75596 197 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 ANXA3P12429 323 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 GSTM3P21266 225 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 CCKBRP32239 447 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 VLDLRP98155 873 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 ZNF33BQ06732 778 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 ZNF750Q32MQ0 723 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 GGTA1PQ4G0N0 100 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 DHRS4L2Q6PKH6 230 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 SERPINA11Q86U17 422 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 B3GNT7Q8NFL0 401 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 CCL4L1Q8NHW4 92 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 SUN3Q8TAQ9 357 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 GATAD2BQ8WXI9 593 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 DHRS1Q96LJ7 313 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 HDAC8Q9BY41 377 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 FXYD6Q9H0Q3 95 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 QRSL1Q9H0R6 528 aaKnown RBP10.65□□□□□ -0.7
SMPD4-218ENST00000482171 TAAR2Q9P1P5 351 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 ZNF225Q9UK10 706 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 PPT2Q9UMR5 302 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 GPR52Q9Y2T5 361 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 YBX2Q9Y2T7 364 aaKnown RBP10.65□□□□□ -0.7
SMPD4-218ENST00000482171 CACNA1IQ9P0X4 2223 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 ARID2Q68CP9 1835 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 NUPL2O15504 423 aaKnown RBP10.65□□□□□ -0.7
SMPD4-218ENST00000482171 EEF1E1O43324 174 aaKnown RBP10.65□□□□□ -0.7
SMPD4-218ENST00000482171 CSTAP01040 98 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 HMGN1P05114 100 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 MRPL3P09001 348 aaKnown RBP10.65□□□□□ -0.7
SMPD4-218ENST00000482171 CXCR1P25024 350 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 GP2P55259 537 aaKnown RBP10.65□□□□□ -0.7
SMPD4-218ENST00000482171 ZMYND11Q15326 602 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 SOWAHCQ53LP3 525 aaPredicted RBP10.65□□□□□ -0.7
SMPD4-218ENST00000482171 COX20Q5RI15 118 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 C1QTNF12Q5T7M4 302 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 ZNF767PQ75MW2 155 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 SLC29A4Q7RTT9 530 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 TECPR1Q7Z6L1 1165 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 OR51G2Q8NGK0 314 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 BRD7Q9NPI1 651 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 TNFRSF10DQ9UBN6 386 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 SPTA1P02549 2419 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 HMX3A6NHT5 357 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 SOX30O94993 753 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 CPNE6O95741 557 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 CSNK1EP49674 416 aaKnown RBP10.65□□□□□ -0.7
SMPD4-218ENST00000482171 CXCR4P61073 352 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 CTU2Q2VPK5 515 aaKnown RBP10.65□□□□□ -0.7
SMPD4-218ENST00000482171 OLFML2AQ68BL7 652 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 C18orf63Q68DL7 685 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 KIAA1211LQ6NV74 962 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 HORMAD2Q8N7B1 307 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 OR10H5Q8NGA6 315 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 PCNPQ8WW12 178 aaKnown RBP10.65□□□□□ -0.7
SMPD4-218ENST00000482171 TXNDC15Q96J42 360 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 HYLS1Q96M11 299 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 ZNF300Q96RE9 604 aaPredicted RBP10.65□□□□□ -0.7
SMPD4-218ENST00000482171 STUB1Q9UNE7 303 aa10.65□□□□□ -0.7
SMPD4-218ENST00000482171 TDRD15B5MCY1 1934 aaKnown RBP10.65□□□□□ -0.71
SMPD4-218ENST00000482171 CLDN24A6NM45 220 aa10.64□□□□□ -0.71
SMPD4-218ENST00000482171 ICMTO60725 284 aa10.64□□□□□ -0.71
SMPD4-218ENST00000482171 KCNJ13O60928 360 aa10.64□□□□□ -0.71
SMPD4-218ENST00000482171 ZNF217O75362 1048 aa10.64□□□□□ -0.71
SMPD4-218ENST00000482171 ACVR2AP27037 513 aa10.64□□□□□ -0.71
SMPD4-218ENST00000482171 MAGEA2P43356 314 aa10.64□□□□□ -0.71
SMPD4-218ENST00000482171 ADPRHP54922 357 aa10.64□□□□□ -0.71
SMPD4-218ENST00000482171 EXOSC7Q15024 291 aaKnown RBP10.64□□□□□ -0.71
SMPD4-218ENST00000482171 TMEM52BQ4KMG9 183 aa10.64□□□□□ -0.71
SMPD4-218ENST00000482171 BCL2L15Q5TBC7 163 aa10.64□□□□□ -0.71
SMPD4-218ENST00000482171 SLITRK4Q8IW52 837 aa10.64□□□□□ -0.71
SMPD4-218ENST00000482171 AVL9Q8NBF6 648 aa10.64□□□□□ -0.71
SMPD4-218ENST00000482171 OR13H1Q8NG92 308 aa10.64□□□□□ -0.71
SMPD4-218ENST00000482171 COQ8AQ8NI60 647 aa10.64□□□□□ -0.71
SMPD4-218ENST00000482171 ZNF707Q96C28 371 aaPredicted RBP10.64□□□□□ -0.71
SMPD4-218ENST00000482171 NELL2Q99435 816 aa10.64□□□□□ -0.71
SMPD4-218ENST00000482171 SPATA9Q9BWV2 254 aa10.64□□□□□ -0.71
SMPD4-218ENST00000482171 CDADC1Q9BWV3 514 aa10.64□□□□□ -0.71
SMPD4-218ENST00000482171 IKZF5Q9H5V7 419 aa10.64□□□□□ -0.71
SMPD4-218ENST00000482171 NANSQ9NR45 359 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms