RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 NODALQ96S42 347 aa11.24□□□□□ -0.61
TRA2B-212ENST00000480461 OR51I1Q9H343 314 aa11.24□□□□□ -0.61
TRA2B-212ENST00000480461 PIGUQ9H490 435 aa11.24□□□□□ -0.61
TRA2B-212ENST00000480461 TPT1P8Q9HAU6 139 aa11.24□□□□□ -0.61
TRA2B-212ENST00000480461 IL1RL2Q9HB29 575 aa11.24□□□□□ -0.61
TRA2B-212ENST00000480461 DEPPQ9NTK1 212 aa11.24□□□□□ -0.61
TRA2B-212ENST00000480461 ARL8BQ9NVJ2 186 aa11.24□□□□□ -0.61
TRA2B-212ENST00000480461 GIN1Q9NXP7 522 aa11.24□□□□□ -0.61
TRA2B-212ENST00000480461 LUZP4Q9P127 313 aa11.24□□□□□ -0.61
TRA2B-212ENST00000480461 LEF1Q9UJU2 399 aaPredicted RBP11.24□□□□□ -0.61
TRA2B-212ENST00000480461 GMEB1Q9Y692 573 aa11.24□□□□□ -0.61
TRA2B-212ENST00000480461 CHCHD2Q9Y6H1 151 aaPredicted RBP11.24□□□□□ -0.61
TRA2B-212ENST00000480461 CPAMD8Q8IZJ3 1885 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 A0A0G2JMM0 328 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 A0A1W2PPB8 328 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 A0A1W2PRS3 328 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 A8MVJ9 347 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 KIR3DP1A8MWS1 328 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 CLIC1O00299 241 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 HMGN4O00479 90 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 ACOX3O15254 700 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 REM1O75628 298 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 PPM1BO75688 479 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 SP1P08047 785 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 ALOX5P09917 674 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 NUDT7P0C024 238 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 OR12D1P0DN82 309 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 CCL3P10147 92 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 ETFAP13804 333 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 NAGAP17050 411 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 ELAVL4P26378 380 aaKnown RBP11.23□□□□□ -0.61
TRA2B-212ENST00000480461 CHI3L1P36222 383 aaPredicted RBP11.23□□□□□ -0.61
TRA2B-212ENST00000480461 PRIM2P49643 509 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 MRPS22P82650 360 aaKnown RBP11.23□□□□□ -0.61
TRA2B-212ENST00000480461 FUT5Q11128 374 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 CAPRIN1Q14444 709 aaKnown RBP11.23□□□□□ -0.61
TRA2B-212ENST00000480461 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRA2B-212ENST00000480461 SLC6A19Q695T7 634 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 BICRALQ6AI39 1079 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 REP15Q6BDI9 236 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 TNFAIP8L2Q6P589 184 aaPredicted RBP11.23□□□□□ -0.61
TRA2B-212ENST00000480461 FIGNL1Q6PIW4 674 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 OPN5Q6U736 354 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 TAGAPQ8N103 731 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 SLC34A3Q8N130 599 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 CCDC197Q8NCU1 140 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 OR4C3Q8NH37 302 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 RP9Q8TA86 221 aaKnown RBP11.23□□□□□ -0.61
TRA2B-212ENST00000480461 SLC22A8Q8TCC7 542 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 XAGE5Q8WWM1 108 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 EFHD2Q96C19 240 aaPredicted RBP11.23□□□□□ -0.61
TRA2B-212ENST00000480461 SPACA9Q96E40 222 aaPredicted RBP11.23□□□□□ -0.61
TRA2B-212ENST00000480461 LRRC37BQ96QE4 947 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 ADOQ96SZ5 270 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 STACQ99469 402 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 SLC39A3Q9BRY0 314 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 RTN4RQ9BZR6 473 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRA2B-212ENST00000480461 KLHL1Q9NR64 748 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 DUSP22Q9NRW4 184 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 CBLCQ9ULV8 474 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 FAF1Q9UNN5 650 aaPredicted RBP11.23□□□□□ -0.61
TRA2B-212ENST00000480461 B3GNT3Q9Y2A9 372 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 HRH3Q9Y5N1 445 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 SHANK1Q9Y566 2161 aa11.23□□□□□ -0.61
TRA2B-212ENST00000480461 PINLYPA6NC86 204 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 C2orf72A6NCS6 295 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 TTLL8A6PVC2 850 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 C17orf51A8MQB3 221 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 B4DXG7 233 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 G3V3Y1 287 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 CDK2AP1O14519 115 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 NDUFAB1O14561 156 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 ANGPT2O15123 496 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 FCMRO60667 390 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 DPM1O60762 260 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 KCNH1O95259 989 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 ANP32DO95626 131 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 IL33O95760 270 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 T-ENOLP0DO92 83 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 CYP4B1P13584 511 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 PTGDSP41222 190 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 RGNQ15493 299 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 INPP5JQ15735 1006 aaPredicted RBP11.22□□□□□ -0.61
TRA2B-212ENST00000480461 HIVEP3Q5T1R4 2406 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 AP1ARQ63HQ0 302 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 FAM91A1Q658Y4 838 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 SLC25A25Q6KCM7 469 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 HEPHL1Q6MZM0 1159 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 NANOGP8Q6NSW7 305 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 BHLHB9Q6PI77 547 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 APOOLQ6UXV4 268 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 NUP54Q7Z3B4 507 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 CNTRLQ7Z7A1 2325 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 CYP4Z2PQ8N1L4 340 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 TRIML2Q8N7C3 387 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 OR52N2Q8NGI0 321 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 FBXO27Q8NI29 283 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 SPPL2AQ8TCT8 520 aa11.22□□□□□ -0.61
TRA2B-212ENST00000480461 ADAMTS15Q8TE58 950 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms