RNA–Protein interactions for RNA: ENST00000479541.1

RNF216-208, Transcript of ring finger protein 216, human

TSL 4

Gene RNF216, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF216-208	ENST00000479541	UPF3A	Q9H1J1	476 aa	Known RBP	3.88	□□□□□ -1.79
RNF216-208	ENST00000479541	CXXC4	Q9H2H0	198 aa		3.88	□□□□□ -1.79
RNF216-208	ENST00000479541	RIBC2	Q9H4K1	309 aa		3.88	□□□□□ -1.79
RNF216-208	ENST00000479541	WDR41	Q9HAD4	459 aa		3.88	□□□□□ -1.79
RNF216-208	ENST00000479541	ELL3	Q9HB65	397 aa	Predicted RBP	3.88	□□□□□ -1.79
RNF216-208	ENST00000479541	GTSE1	Q9NYZ3	720 aa		3.88	□□□□□ -1.79
RNF216-208	ENST00000479541	THYN1	Q9P016	225 aa		3.88	□□□□□ -1.79
RNF216-208	ENST00000479541	ATXN10	Q9UBB4	475 aa		3.88	□□□□□ -1.79
RNF216-208	ENST00000479541	EIF3K	Q9UBQ5	218 aa	Known RBP	3.88	□□□□□ -1.79
RNF216-208	ENST00000479541	MIOX	Q9UGB7	285 aa		3.88	□□□□□ -1.79
RNF216-208	ENST00000479541	NIP7	Q9Y221	180 aa	Known RBP eCLIP	3.88	□□□□□ -1.79
RNF216-208	ENST00000479541	FASN	P49327	2511 aa	Known RBP	3.88	□□□□□ -1.79
RNF216-208	ENST00000479541	ZMYM6	O95789	1325 aa		3.88	□□□□□ -1.79
RNF216-208	ENST00000479541	CDHR2	Q9BYE9	1310 aa		3.88	□□□□□ -1.79
RNF216-208	ENST00000479541	MAST4	O15021	2626 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	NPIPA5	A0A0B4J1W7	369 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	IGHV3-20	A0A0C4DH32	117 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	IGLON5	A6NGN9	336 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	CYSRT1	A8MQ03	144 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	NPIPA5	E9PKD4	350 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541		E9PMD0	336 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	SGK494	L7N484	410 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	EI24	O14681	340 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	AK1	P00568	194 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	IGHD	P01880	384 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	KRT6B	P04259	564 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	SERPINB2	P05120	415 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	TPM2	P07951	284 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	FUT1	P19526	365 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	DPP4	P27487	766 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	PTPN6	P29350	595 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	AXL	P30530	894 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	ID1	P41134	155 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	ACAA2	P42765	397 aa	Known RBP	3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	MTIF2	P46199	727 aa	Known RBP	3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	KRT6C	P48668	564 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	RIDA	P52758	137 aa	Known RBP	3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	NOP14	P78316	857 aa	Known RBP	3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	SRPX	P78539	464 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	IL9R	Q01113	521 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	BNIP1	Q12981	228 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	TPD52L1	Q16890	204 aa	Predicted RBP	3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	KNOP1	Q1ED39	458 aa	Known RBP	3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	RIPPLY2	Q5TAB7	128 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	LIPK	Q5VXJ0	399 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	NEPRO	Q6NW34	567 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	GSG1L	Q6UXU4	331 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	P4HA3	Q7Z4N8	544 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	BANP	Q8N9N5	519 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	WDR36	Q8NI36	951 aa	Known RBP	3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	ANP32B	Q92688	251 aa	Known RBP	3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	OPRPN	Q99935	248 aa	Predicted RBP	3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	CARD6	Q9BX69	1037 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	FGFBP2	Q9BYJ0	223 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	NLN	Q9BYT8	704 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	MOB1A	Q9H8S9	216 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	POLD4	Q9HCU8	107 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	YAE1D1	Q9NRH1	226 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	THEG	Q9P2T0	379 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	AUP1	Q9Y679	476 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	FKBP7	Q9Y680	259 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	DNAH12	Q6ZR08	3092 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	ABCC4	O15439	1325 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	MYH15	Q9Y2K3	1946 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	RTL1	A6NKG5	1358 aa		3.87	□□□□□ -1.79
RNF216-208	ENST00000479541	IGHV4-30-2	A0A087WSY4	118 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541		A0A087X002	238 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	RNF212B	A8MTL3	300 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541		H3BTX0	84 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	PDHX	O00330	501 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	DUSP11	O75319	330 aa	Known RBP	3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	ZFAND5	O76080	213 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	MFN2	O95140	757 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	NDUFA7	O95182	113 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	SLC35G4	P0C7Q5	338 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	CFC1B	P0CG36	223 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	CFC1	P0CG37	223 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	CALCB	P10092	127 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	NCF1	P14598	390 aa	Predicted RBP	3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	PPP2R1B	P30154	601 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	SLC7A2	P52569	658 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	NAPA	P54920	295 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	RPS27A	P62979	156 aa	Known RBP	3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	SRY	Q05066	204 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	NECTIN1	Q15223	517 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	ZSWIM7	Q19AV6	140 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	ACSF3	Q4G176	576 aa	Predicted RBP	3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	MUC21	Q5SSG8	566 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	FAAP20	Q6NZ36	180 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	GDPGP1	Q6ZNW5	385 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	LUZP1	Q86V48	1076 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	AMZ2	Q86W34	360 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	SAMD12	Q8N8I0	201 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	OR1K1	Q8NGR3	316 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	GTF3A	Q92664	365 aa	Known RBP	3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	C11orf52	Q96A22	123 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	CCDC51	Q96ER9	411 aa		3.86	□□□□□ -1.79
RNF216-208	ENST00000479541	MCRIP2	Q9BUT9	160 aa	Known RBP	3.86	□□□□□ -1.79

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