RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 MAP2K1Q02750 393 aaPredicted RBP3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 HSF2Q03933 536 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 HSPA14Q0VDF9 509 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 ADPRMQ3LIE5 342 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 CT45A2Q5DJT8 189 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 ZNF506Q5JVG8 444 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 SLC25A30Q5SVS4 291 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 LEMD1Q68G75 181 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 REG3GQ6UW15 175 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 BNIPLQ7Z465 357 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 CEACAM19Q7Z692 300 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 LUZP1Q86V48 1076 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 MISPQ8IVT2 679 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 STHQ8IWL8 128 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 FGFRL1Q8N441 504 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 ZNF321PQ8N8H1 164 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 SAMD12Q8N8I0 201 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 FAM184AQ8NB25 1140 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 SIDT2Q8NBJ9 832 aaKnown RBP3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 BBOF1Q8ND07 529 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 UBTD2Q8WUN7 234 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 C4orf36Q96KX1 117 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 C1orf147Q96MC9 270 aaPredicted RBP3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 NTMT1Q9BV86 223 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 NMNAT2Q9BZQ4 307 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 NT5DC2Q9H857 520 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 GDF3Q9NR23 364 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 SLC7A10Q9NS82 523 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 NOSIPQ9Y314 301 aaKnown RBP3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 MRPS2Q9Y399 296 aaKnown RBP3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 MRPL11Q9Y3B7 192 aaKnown RBP3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 FBXO7Q9Y3I1 522 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 ABCC4O15439 1325 aa3.09□□□□□ -1.91
SMARCA1-204ENST00000478420 HCFC1P51610 2035 aa3.09□□□□□ -1.92
SMARCA1-204ENST00000478420 GON4LQ3T8J9 2241 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 TMEM89A2RUT3 159 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 POLR3GO15318 223 aaPredicted RBP3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 POLR2DO15514 142 aaKnown RBP3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 PHF1O43189 567 aaPredicted RBP3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 BCL2L11O43521 198 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 DUSP11O75319 330 aaKnown RBP3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 SRSF10O75494 262 aaKnown RBP3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 SEMA4FO95754 770 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 UGT2B4P06133 528 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 S100A9P06702 114 aaKnown RBP3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 HCKP08631 526 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 RHOXF2BP0C7M4 288 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 OR9G9P0C7N8 305 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 CCDC130P13994 396 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 GP9P14770 177 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 PAICSP22234 425 aaKnown RBP3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 RFC2P35250 354 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 NSFP46459 744 aaKnown RBP3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 PRMT2P55345 433 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 ATP5IP56385 69 aaPredicted RBP3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 CARD18P57730 90 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 HAND2P61296 217 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 GSTO1P78417 241 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 CNTN2Q02246 1040 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 SRSF5Q13243 272 aaKnown RBP3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 BCL7AQ4VC05 210 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 EIPR1Q53HC9 387 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 VWA2Q5GFL6 755 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 DCAF12Q5T6F0 453 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 DDI2Q5TDH0 399 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 LIPJQ5W064 366 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 SEL1L3Q68CR1 1132 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 ARMCX5Q6P1M9 558 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 Q6ZRG5 221 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 WDR49Q8IV35 697 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 CERS5Q8N5B7 392 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 SUMF1Q8NBK3 374 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 ZNRF1Q8ND25 227 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 BEST4Q8NFU0 473 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 OR6M1Q8NGM8 313 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 OR52J3Q8NH60 311 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 GLYATL1Q969I3 302 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 SLC41A3Q96GZ6 507 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 CXorf58Q96LI9 332 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 RHOXF2Q9BQY4 288 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 MRPL13Q9BYD1 178 aaKnown RBP3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 ETNK2Q9NVF9 386 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 TECRQ9NZ01 308 aaKnown RBP3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 MRTO4Q9UKD2 239 aaKnown RBP3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 CHMP2BQ9UQN3 213 aa3.08□□□□□ -1.92
SMARCA1-204ENST00000478420 TP53BP1Q12888 1972 aaPredicted RBP3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 A0A0U1RQS6 177 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 HELTA6NFD8 242 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 E9PAM4 449 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 OR4F21O95013 312 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 NPPAP01160 153 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 STAG3L3P0CL85 134 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 RALAP11233 206 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 BCL3P20749 454 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 PTBP1P26599 531 aaKnown RBP eCLIP3.07□□□□□ -1.921e-9■■□□□ 14.3
SMARCA1-204ENST00000478420 CA8P35219 290 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 HSD17B2P37059 387 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 ALDH3B1P43353 468 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 RPL34P49207 117 aaKnown RBP3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 EIF3EP60228 445 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms