RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 A0A1W2PPV9 198 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 LINC01553A4QN01 128 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 TMEM8BA6NDV4 472 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 AGAP5A6NIR3 686 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 ANHXE9PGG2 379 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 BOLA2-SMG1P6H3BVE0 249 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 TLR4O00206 839 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 CCRL2O00421 344 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 RTCAO00442 366 aaKnown RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 HMGN4O00479 90 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 TPD52L2O43399 206 aaKnown RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 OR1F1O43749 312 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 SLC28A2O43868 658 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 UPK1BO75841 260 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 TBX6O95947 436 aaPredicted RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 PDGFBP01127 241 aaPredicted RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 FSHBP01225 129 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 PTHP01270 115 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 GASTP01350 101 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 DBTP11182 482 aaKnown RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 TGM1P22735 817 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 CHMP24386 653 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 ELAVL4P26378 380 aaKnown RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 NTSP30990 170 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 HOXC12P31275 282 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 CSTF2P33240 577 aaKnown RBP eCLIP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 CNR2P34972 360 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 SOX6P35712 828 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 ETV6P41212 452 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 VIPR2P41587 438 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 IL12RB1P42701 662 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 KIR2DL1P43626 348 aaPredicted RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 KIR2DL2P43627 348 aaPredicted RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 SLC15A1P46059 708 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 CCT3P49368 545 aaKnown RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 RGS6P49758 472 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 KHKP50053 298 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 XKP51811 444 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 NUDT6P53370 316 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 LIMK1P53667 647 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 LIM2P55344 173 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 CYP4F2P78329 520 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 CSNK1G2P78368 415 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 ABATP80404 500 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 SHC2P98077 582 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 RHAGQ02094 409 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 ALDH6A1Q02252 535 aaKnown RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 PRKCDQ05655 676 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 CDC20Q12834 499 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 COX10Q12887 443 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 KRR1Q13601 381 aaKnown RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 GANABQ14697 944 aaKnown RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 NCF4Q15080 339 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 ANGPT1Q15389 498 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 DUSP7Q16829 419 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 FAM78AQ5JUQ0 283 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 TPRG1LQ5T0D9 272 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 PIP5KL1Q5T9C9 394 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 PRAMEF8Q5VWM4 474 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 PRAMEF7Q5VXH5 474 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 RNLSQ5VYX0 342 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 C12orf73Q69YU5 71 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 PLAG1Q6DJT9 500 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 OR4C11Q6IEV9 310 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 KIAA1161Q6NSJ0 714 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 TNFAIP8L2Q6P589 184 aaPredicted RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 BHLHB9Q6PI77 547 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 C19orf48Q6RUI8 117 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 UNQ6494/PRO21346Q6UXR6 183 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 CASP12Q6UXS9 341 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 TMEM64Q6YI46 380 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 GDPGP1Q6ZNW5 385 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 PLEKHG7Q6ZR37 379 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 MAMDC2Q7Z304 686 aaPredicted RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 MMP21Q8N119 569 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 C2orf73Q8N5S3 287 aaPredicted RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 TBC1D19Q8N5T2 526 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 ANKRD53Q8N9V6 530 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 IL17RCQ8NAC3 791 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 PLA2G15Q8NCC3 412 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 B3GNT7Q8NFL0 401 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 GPR32P1Q8NGA4 272 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 OR2L8Q8NGY9 312 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 BBS10Q8TAM1 723 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 SLC38A5Q8WUX1 472 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 EXOSC8Q96B26 276 aaKnown RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 NEURL2Q9BR09 285 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 TIMM29Q9BSF4 260 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 MENTQ9BUN1 341 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 ACAT2Q9BWD1 397 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 TEX101Q9BY14 249 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 ALOXE3Q9BYJ1 711 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 DDX31Q9H8H2 851 aaKnown RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 RMI1Q9H9A7 625 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 SIAEQ9HAT2 523 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 TRPV4Q9HBA0 871 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 SLC25A19Q9HC21 320 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 ZBTB20Q9HC78 741 aaPredicted RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 CPNE5Q9HCH3 593 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 BCL2L10Q9HD36 194 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms