RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 RMND5BQ96G75 393 aaPredicted RBP4.05□□□□□ -1.76
VPS50-214ENST00000477935 GBP5Q96PP8 586 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 RUFY1Q96T51 708 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 POPDC2Q9HBU9 364 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 CISHQ9NSE2 258 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 RHCGQ9UBD6 479 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 EPHA6Q9UF33 1036 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 VANGL2Q9ULK5 521 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 SLC7A7Q9UM01 511 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 SLC17A4Q9Y2C5 497 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 MEMO1Q9Y316 297 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 MFHAS1Q9Y4C4 1052 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 TGP01266 2768 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 CTAG2O75638 210 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 SCRG1O75711 98 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 RECQL5O94762 991 aaPredicted RBP4.04□□□□□ -1.76
VPS50-214ENST00000477935 ADCY5O95622 1261 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 JCHAINP01591 159 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 IGLV1-44P01699 117 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 IGLV3-25P01717 112 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 HOXD4P09016 255 aaPredicted RBP4.04□□□□□ -1.76
VPS50-214ENST00000477935 UGT1A4P22310 534 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 TEAD1P28347 426 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 GCH1P30793 250 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 OR1E1P30953 314 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 ACADSBP45954 432 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 VEGFCP49767 419 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 YWHAEP62258 255 aaKnown RBP4.04□□□□□ -1.76
VPS50-214ENST00000477935 POLR2LP62875 67 aaKnown RBP4.04□□□□□ -1.76
VPS50-214ENST00000477935 ENPEPQ07075 957 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 PNRC1Q12796 327 aaPredicted RBP4.04□□□□□ -1.76
VPS50-214ENST00000477935 NFATC2Q13469 925 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 GOLGA7BQ2TAP0 167 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 DEFB113Q30KQ7 82 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 GRTP1Q5TC63 336 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 SYPL2Q5VXT5 272 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 PMF1Q6P1K2 205 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 IYDQ6PHW0 289 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 LCLAT1Q6UWP7 414 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 CCDC73Q6ZRK6 1079 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 LDB1Q86U70 411 aaPredicted RBP4.04□□□□□ -1.76
VPS50-214ENST00000477935 TAC4Q86UU9 113 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 CLYBLQ8N0X4 340 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 FAM184AQ8NB25 1140 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 SIDT2Q8NBJ9 832 aaKnown RBP4.04□□□□□ -1.76
VPS50-214ENST00000477935 GOT1L1Q8NHS2 421 aaPredicted RBP4.04□□□□□ -1.76
VPS50-214ENST00000477935 UBA3Q8TBC4 463 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 WDR20Q8TBZ3 569 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 ZNF641Q96N77 438 aaPredicted RBP4.04□□□□□ -1.76
VPS50-214ENST00000477935 GFRA4Q9GZZ7 299 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 RAB33BQ9H082 229 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 ACKR4Q9NPB9 350 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 IL17CQ9P0M4 197 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 HPCAL4Q9UM19 191 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 ZNF148Q9UQR1 794 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 BTRCQ9Y297 605 aa4.04□□□□□ -1.76
VPS50-214ENST00000477935 NOTCH3Q9UM47 2321 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 TRAV17A0A0B4J275 112 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 TSPAN11A1L157 253 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 SLC9B1P1A6NJY1 282 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 C9J4A7 227 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 O00370 1275 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 NR5A2O00482 541 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 MAPK13O15264 365 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 SPRY1O43609 319 aaPredicted RBP4.03□□□□□ -1.76
VPS50-214ENST00000477935 IGSF6O95976 241 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 RAF1P04049 648 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 FRMD6-AS1P0C7T7 363 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 PEX19P40855 299 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 RPL34P49207 117 aaKnown RBP4.03□□□□□ -1.76
VPS50-214ENST00000477935 ARSEP51690 589 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 ARF5P84085 180 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 ITGA9Q13797 1035 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 TUBB2AQ13885 445 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 NCF4Q15080 339 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 KNOP1Q1ED39 458 aaKnown RBP4.03□□□□□ -1.76
VPS50-214ENST00000477935 CFAP58Q5T655 872 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 CORO6Q6QEF8 472 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 TMCO3Q6UWJ1 677 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 C16orf47Q6ZP98 133 aaPredicted RBP4.03□□□□□ -1.76
VPS50-214ENST00000477935 Q6ZPB1 254 aaPredicted RBP4.03□□□□□ -1.76
VPS50-214ENST00000477935 ZNF554Q86TJ5 538 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 PAQR7Q86WK9 346 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 TMEM126BQ8IUX1 230 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 LINC00346Q8IVM7 164 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 DNAJC22Q8N4W6 341 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 CPSF7Q8N684 471 aaKnown RBP4.03□□□□□ -1.76
VPS50-214ENST00000477935 ZNF383Q8NA42 475 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 POC5Q8NA72 575 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 KIAA0895Q8NCT3 520 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 OR6K2Q8NGY2 324 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 LILRB4Q8NHJ6 448 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 RSRC1Q96IZ7 334 aaKnown RBP4.03□□□□□ -1.76
VPS50-214ENST00000477935 MAGED4Q96JG8 741 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 ZNF514Q96K75 400 aaPredicted RBP4.03□□□□□ -1.76
VPS50-214ENST00000477935 CNDP1Q96KN2 507 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 SGK494Q96LW2 274 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 GDAP1L1Q96MZ0 367 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 TGM7Q96PF1 710 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 OR2M4Q96R27 311 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms