RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 DDX18Q9NVP1 670 aaKnown RBP10.66□□□□□ -0.7
LSM2-212ENST00000477182 SLC25A37Q9NYZ2 338 aa10.66□□□□□ -0.7
LSM2-212ENST00000477182 PLA2G3Q9NZ20 509 aa10.66□□□□□ -0.7
LSM2-212ENST00000477182 VAPAQ9P0L0 249 aa10.66□□□□□ -0.7
LSM2-212ENST00000477182 PTGFRNQ9P2B2 879 aa10.66□□□□□ -0.7
LSM2-212ENST00000477182 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.66□□□□□ -0.7
LSM2-212ENST00000477182 BCAP29Q9UHQ4 241 aa10.66□□□□□ -0.7
LSM2-212ENST00000477182 ZNF639Q9UID6 485 aa10.66□□□□□ -0.7
LSM2-212ENST00000477182 PCDHB14Q9Y5E9 798 aa10.66□□□□□ -0.7
LSM2-212ENST00000477182 INTS1Q8N201 2190 aaKnown RBP10.66□□□□□ -0.7
LSM2-212ENST00000477182 GTF3C1Q12789 2109 aa10.66□□□□□ -0.7
LSM2-212ENST00000477182 HCFC1P51610 2035 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 COL6A5A8TX70 2615 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 A0A087WV62 115 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 TRBV5-3A0A0A0MS03 114 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 KIAA1324LA8MWY0 1029 aaPredicted RBP10.65□□□□□ -0.7
LSM2-212ENST00000477182 E9PLN8 166 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 UPK1AO00322 258 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 PLOD3O60568 738 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 SLITRK5O94991 958 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 CLPSP04118 112 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 C8BP07358 591 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 SOX11P35716 441 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 MNAT1P51948 309 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 PRKAG1P54619 331 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 SLC26A5P58743 744 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 PRR5P85299 388 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 SLC25A3Q00325 362 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 FUT7Q11130 342 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 DUSP8Q13202 625 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 TP53BP2Q13625 1128 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 HACD2Q6Y1H2 254 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 TMEM64Q6YI46 380 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 RINLQ6ZS11 566 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 PRIMA1Q86XR5 153 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 OR2L13Q8N349 312 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 MORN4Q8NDC4 146 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 NUP43Q8NFH3 380 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 OR52R1Q8NGF1 315 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 PNPT1Q8TCS8 783 aaKnown RBP10.65□□□□□ -0.7
LSM2-212ENST00000477182 ZNF721Q8TF20 911 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 ZFP90Q8TF47 636 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 NRGNQ92686 78 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 NCLNQ969V3 563 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 ROPN1LQ96C74 230 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 ART5Q96L15 291 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 ALPK1Q96QP1 1244 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 VKORC1Q9BQB6 163 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 CPPED1Q9BRF8 314 aaPredicted RBP10.65□□□□□ -0.7
LSM2-212ENST00000477182 RNF32Q9H0A6 362 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 EQTNQ9NQ60 294 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 NTMQ9P121 344 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 ST6GALNAC2Q9UJ37 374 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 C19orf53Q9UNZ5 99 aaPredicted RBP10.65□□□□□ -0.7
LSM2-212ENST00000477182 VPS13CQ709C8 3753 aa10.65□□□□□ -0.7
LSM2-212ENST00000477182 NSG1A0A0A6YYJ2 146 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 A0A1W2PQ72 361 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 CLIC1O00299 241 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 NPPAP01160 153 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 IGKV3-11P04433 115 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 KRT16P08779 473 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 IFI6P09912 130 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 DNASE1P24855 282 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 CPOXP36551 454 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 MEOX1P50221 254 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 CASP9P55211 416 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 MTPNP58546 118 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 PSME3P61289 254 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 RPS26P62854 115 aaKnown RBP10.64□□□□□ -0.71
LSM2-212ENST00000477182 ADAM8P78325 824 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 SELPLGQ14242 412 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 RUNDC3AQ59EK9 446 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 SAXO2Q658L1 398 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 ANGPTL8Q6UXH0 198 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 RNF111Q6ZNA4 994 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 Q71RC1 249 aaPredicted RBP10.64□□□□□ -0.71
LSM2-212ENST00000477182 NDUFAF7Q7L592 441 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 C6orf120Q7Z4R8 191 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 DMRTC2Q8IXT2 367 aaPredicted RBP10.64□□□□□ -0.71
LSM2-212ENST00000477182 ZNF615Q8N8J6 731 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 RBM15BQ8NDT2 890 aaKnown RBP10.64□□□□□ -0.71
LSM2-212ENST00000477182 B3GNT7Q8NFL0 401 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 OR7G1Q8NGA0 311 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 OR56A1Q8NGH5 318 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 MOAP1Q96BY2 351 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 C18orf12Q96KH6 178 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 SLC35G5Q96KT7 338 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 IMMP1LQ96LU5 166 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 GPR137Q96N19 417 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 ANKRD27Q96NW4 1050 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 MS4A4EQ96PG1 132 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 OR10A5Q9H207 317 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 TPT1P8Q9HAU6 139 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 ZNF160Q9HCG1 818 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 STMN3Q9NZ72 180 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 EXPH5Q8NEV8 1989 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 CPAMD8Q8IZJ3 1885 aa10.64□□□□□ -0.71
LSM2-212ENST00000477182 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.63□□□□□ -0.71
LSM2-212ENST00000477182 TRBV11-1A0A0K0K1C0 115 aa10.63□□□□□ -0.71
LSM2-212ENST00000477182 FAM171A2A8MVW0 826 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms