RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 PRAMEF20Q5VT98 475 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 NANOGP8Q6NSW7 305 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 TNFAIP8L2Q6P589 184 aaPredicted RBP13.23□□□□□ -0.29
CCNL1-217ENST00000476367 ZCCHC12Q6PEW1 402 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 FAM180AQ6UWF9 173 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 OLIG3Q7RTU3 272 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 ZNF605Q86T29 641 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 CDRT4Q8N9R6 151 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 FAM110BQ8TC76 370 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 JADE3Q92613 823 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 CDS1Q92903 461 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 TMBIM1Q969X1 311 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 MOAP1Q96BY2 351 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 SNRNP40Q96DI7 357 aaKnown RBP13.23□□□□□ -0.29
CCNL1-217ENST00000476367 OMA1Q96E52 524 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 HSPBAP1Q96EW2 488 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 OR7D2Q96RA2 312 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 TAAR6Q96RI8 345 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 OR51I1Q9H343 314 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 NANOGQ9H9S0 305 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 SH2D2AQ9NP31 389 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 ASF1BQ9NVP2 202 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 KLF13Q9Y2Y9 288 aaPredicted RBP13.23□□□□□ -0.29
CCNL1-217ENST00000476367 PYCARD-AS1I3L0S3 204 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 AIM2O14862 343 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 ACOX3O15254 700 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 TSPAN2O60636 221 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 TNFRSF21O75509 655 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 NUDT7P0C024 238 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 ETFAP13804 333 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 GPX2P18283 190 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 MATN1P21941 496 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 SLC6A2P23975 617 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 GABRA3P34903 492 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 CPOXP36551 454 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 RFC3P40938 356 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 MTPNP58546 118 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 NFYCQ13952 458 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 RGNQ15493 299 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 INAQ16352 499 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 NTRK2Q16620 822 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 RABL3Q5HYI8 236 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 HEPHL1Q6MZM0 1159 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.22□□□□□ -0.29
CCNL1-217ENST00000476367 SLC34A3Q8N130 599 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 GOLM1Q8NBJ4 401 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 FAM98AQ8NCA5 519 aaKnown RBP13.22□□□□□ -0.29
CCNL1-217ENST00000476367 GRHL3Q8TE85 626 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 SLC9A6Q92581 669 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 RAB8BQ92930 207 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 NTNG2Q96CW9 530 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 CMTM5Q96DZ9 223 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 RSPO3Q9BXY4 272 aaPredicted RBP13.22□□□□□ -0.29
CCNL1-217ENST00000476367 PIGUQ9H490 435 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 DUSP22Q9NRW4 184 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 DEPPQ9NTK1 212 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 GIN1Q9NXP7 522 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 GMPR2Q9P2T1 348 aaKnown RBP13.22□□□□□ -0.29
CCNL1-217ENST00000476367 PCDHGB6Q9Y5F9 930 aa13.22□□□□□ -0.29
CCNL1-217ENST00000476367 FREM3P0C091 2139 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 NBASA2RRP1 2371 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 REM1O75628 298 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 PPM1BO75688 479 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 UBOX5O94941 541 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 KCNK2O95069 426 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 ANP32DO95626 131 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 P04436 131 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 OR12D1P0DN82 309 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 BMP2P12643 396 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 KRT20P35900 424 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 CHI3L1P36222 383 aaPredicted RBP13.21□□□□□ -0.29
CCNL1-217ENST00000476367 PIGAP37287 484 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 RFX3P48380 749 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 MEOX1P50221 254 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 CCNJQ5T5M9 372 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 AP1ARQ63HQ0 302 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 RPUSD3Q6P087 351 aaKnown RBP13.21□□□□□ -0.29
CCNL1-217ENST00000476367 GALNT10Q86SR1 603 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 SULF2Q8IWU5 870 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 DND1Q8IYX4 353 aaKnown RBP13.21□□□□□ -0.29
CCNL1-217ENST00000476367 TRIML2Q8N7C3 387 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 OR52N2Q8NGI0 321 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 GPR151Q8TDV0 419 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 EFHD2Q96C19 240 aaPredicted RBP13.21□□□□□ -0.29
CCNL1-217ENST00000476367 SLC35G5Q96KT7 338 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 SGCZQ96LD1 299 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 STACQ99469 402 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 KAT8Q9H7Z6 458 aaKnown RBP13.21□□□□□ -0.29
CCNL1-217ENST00000476367 PROK2Q9HC23 129 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 Q9N2J8 555 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 SACM1LQ9NTJ5 587 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 FLRT3Q9NZU0 649 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.21□□□□□ -0.29
CCNL1-217ENST00000476367 TAGLN3Q9UI15 199 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 CHCHD2Q9Y6H1 151 aaPredicted RBP13.21□□□□□ -0.29
CCNL1-217ENST00000476367 HEATR5AQ86XA9 2040 aa13.21□□□□□ -0.29
CCNL1-217ENST00000476367 CCT8L1PA6NM43 557 aa13.21□□□□□ -0.3
CCNL1-217ENST00000476367 B4DXG7 233 aa13.21□□□□□ -0.3
CCNL1-217ENST00000476367 PEX1O43933 1283 aa13.21□□□□□ -0.3
CCNL1-217ENST00000476367 NPPAP01160 153 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms