RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 CROCCP3Q8IVE0 287 aa16.77■□□□□ 0.28
ATG4B-217ENST00000475693 ADAMTS16Q8TE57 1224 aa16.77■□□□□ 0.28
ATG4B-217ENST00000475693 METTL21AQ8WXB1 218 aa16.77■□□□□ 0.28
ATG4B-217ENST00000475693 ARSGQ96EG1 525 aa16.77■□□□□ 0.28
ATG4B-217ENST00000475693 RMND5BQ96G75 393 aaPredicted RBP16.77■□□□□ 0.28
ATG4B-217ENST00000475693 GAL3ST4Q96RP7 486 aa16.77■□□□□ 0.28
ATG4B-217ENST00000475693 P2RX2Q9UBL9 471 aa16.77■□□□□ 0.28
ATG4B-217ENST00000475693 C9J4A7 227 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 H3BSA7 217 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 DIRAS1O95057 198 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 IGKV1D-16P01601 117 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 IGKV3-11P04433 115 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 CELA2AP08217 269 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 CCNYL3P0C7X3 344 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 CT45A8P0DMV1 189 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 CT45A9P0DMV2 189 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 PCSK6P29122 969 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 MAP3K8P41279 467 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 PCBP3P57721 371 aaKnown RBP16.77■□□□□ 0.27
ATG4B-217ENST00000475693 EIF3IQ13347 325 aaKnown RBP16.77■□□□□ 0.27
ATG4B-217ENST00000475693 CT45A2Q5DJT8 189 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 TBCELQ5QJ74 424 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 TMEM164Q5U3C3 297 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 C16orf62Q7Z3J2 963 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 TMPRSS12Q86WS5 348 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 ZSCAN1Q8NBB4 408 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 FBXL20Q96IG2 436 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 SLC46A1Q96NT5 459 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 COL21A1Q96P44 957 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 TRIM15Q9C019 465 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 C8orf4Q9NR00 106 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 OLAHQ9NV23 265 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 PCDHGA3Q9Y5H0 932 aa16.77■□□□□ 0.27
ATG4B-217ENST00000475693 CLDN24A6NM45 220 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 ALOX5P09917 674 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 RBBP4Q09028 425 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 PPP1R8Q12972 351 aaKnown RBP16.76■□□□□ 0.27
ATG4B-217ENST00000475693 KRT80Q6KB66 452 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 C9orf40Q8IXQ3 194 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 PRR22Q8IZ63 422 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 COX18Q8N8Q8 333 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 CDRT4Q8N9R6 151 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 FKBP10Q96AY3 582 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 HSH2DQ96JZ2 352 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 SPATA9Q9BWV2 254 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 SLC38A1Q9H2H9 487 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 MUC13Q9H3R2 512 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 PIGUQ9H490 435 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 CCM2LQ9NUG4 571 aaPredicted RBP16.76■□□□□ 0.27
ATG4B-217ENST00000475693 ANAPC2Q9UJX6 822 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 ZNF223Q9UK11 482 aaPredicted RBP16.76■□□□□ 0.27
ATG4B-217ENST00000475693 PRAMEF25A6NGN4 478 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 SPINK2P20155 84 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 PSMA4P25789 261 aaKnown RBP16.76■□□□□ 0.27
ATG4B-217ENST00000475693 GPR143P51810 404 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 GPR68Q15743 365 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 NHSL2Q5HYW2 709 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 EXOSC6Q5RKV6 272 aaKnown RBP16.76■□□□□ 0.27
ATG4B-217ENST00000475693 HMBOX1Q6NT76 420 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 PAPD4Q6PIY7 484 aaKnown RBP16.76■□□□□ 0.27
ATG4B-217ENST00000475693 CPEB2Q7Z5Q1 589 aaKnown RBP16.76■□□□□ 0.27
ATG4B-217ENST00000475693 SDF2Q99470 211 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 ZPBPQ9BS86 351 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 CHID1Q9BWS9 393 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 ANGPT4Q9Y264 503 aa16.76■□□□□ 0.27
ATG4B-217ENST00000475693 LOC101059948A0A1B0GTJ6 334 aa16.75■□□□□ 0.27
ATG4B-217ENST00000475693 TRIM64A6NGJ6 449 aa16.75■□□□□ 0.27
ATG4B-217ENST00000475693 hCG_2039718K7EN88 272 aa16.75■□□□□ 0.27
ATG4B-217ENST00000475693 PRAMEF2O60811 474 aa16.75■□□□□ 0.27
ATG4B-217ENST00000475693 FUT4P22083 530 aa16.75■□□□□ 0.27
ATG4B-217ENST00000475693 YAP1P46937 504 aaKnown RBP16.75■□□□□ 0.27
ATG4B-217ENST00000475693 NRF1Q16656 503 aa16.75■□□□□ 0.27
ATG4B-217ENST00000475693 INTS11Q5TA45 600 aaKnown RBP16.75■□□□□ 0.27
ATG4B-217ENST00000475693 FKBP9P1Q75LS8 142 aa16.75■□□□□ 0.27
ATG4B-217ENST00000475693 CBLL1Q75N03 491 aa16.75■□□□□ 0.27
ATG4B-217ENST00000475693 SLC47A1Q96FL8 570 aa16.75■□□□□ 0.27
ATG4B-217ENST00000475693 PCDHGA8Q9Y5G5 932 aa16.75■□□□□ 0.27
ATG4B-217ENST00000475693 NUP107P57740 925 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 DCST2Q5T1A1 773 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 HEPHL1Q6MZM0 1159 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 TMEM205Q6UW68 189 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 VRK2Q86Y07 508 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 APCDD1LQ8NCL9 501 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 NFAM1Q8NET5 270 aaPredicted RBP16.74■□□□□ 0.27
ATG4B-217ENST00000475693 OR1N1Q8NGS0 311 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 OR2Y1Q8NGV0 311 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 ADAMTS14Q8WXS8 1223 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 TFAP2CQ92754 450 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 DAZLQ92904 295 aaKnown RBP16.74■□□□□ 0.27
ATG4B-217ENST00000475693 PYURFQ96I23 114 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 NXF5Q9H1B4 397 aaKnown RBP16.74■□□□□ 0.27
ATG4B-217ENST00000475693 WDR54Q9H977 334 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 POLR1BQ9H9Y6 1135 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 KCNE5Q9UJ90 142 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 SH3GLB1Q9Y371 365 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 HS3ST3B1Q9Y662 390 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 DMXL2Q8TDJ6 3036 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 PEX12O00623 359 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 COQ9O75208 318 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 KCNK2O95069 426 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms