RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 ITLN2Q8WWU7 325 aaPredicted RBP17.29■□□□□ 0.36
PTCD3-210ENST00000473829 SLC9A6Q92581 669 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 MAELQ96JY0 434 aaKnown RBP17.29■□□□□ 0.36
PTCD3-210ENST00000473829 YIPF4Q9BSR8 244 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 LDAHQ9H6V9 325 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 SLCO1B3Q9NPD5 702 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 PNPLA3Q9NST1 481 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 QPCTLQ9NXS2 382 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 B4GALT7Q9UBV7 327 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 MAPRE3Q9UPY8 281 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 SNX8Q9Y5X2 465 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 C9JVG2 144 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 SLCO1B7G3V0H7 640 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 SUSD5O60279 629 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 HCN1O60741 890 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 SCN2BO60939 215 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 IL33O95760 270 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 HMGN2P05204 90 aaKnown RBP17.28■□□□□ 0.36
PTCD3-210ENST00000473829 RFX3P48380 749 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 MAN2A2P49641 1150 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 NME5P56597 212 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 PPP2R2AP63151 447 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 HBA1P69905 142 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 MRPS22P82650 360 aaKnown RBP17.28■□□□□ 0.36
PTCD3-210ENST00000473829 DECR1Q16698 335 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 GALNT10Q86SR1 603 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 RPRMLQ8N4K4 120 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 MARVELD2Q8N4S9 558 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 NATD1Q8N6N6 113 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 OR5M9Q8NGP3 310 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 OR1J4Q8NGS1 313 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 GPR151Q8TDV0 419 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 RMND5BQ96G75 393 aaPredicted RBP17.28■□□□□ 0.36
PTCD3-210ENST00000473829 MARK4Q96L34 752 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 C7orf26Q96N11 449 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 OR52B2Q96RD2 323 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 DMRTA2Q96SC8 542 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 RTN4RQ9BZR6 473 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 ACKR4Q9NPB9 350 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 SERHLQ9NQF3 203 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 SUCOQ9UBS9 1254 aaKnown RBP17.28■□□□□ 0.36
PTCD3-210ENST00000473829 PLEKHB1Q9UF11 243 aaPredicted RBP17.28■□□□□ 0.36
PTCD3-210ENST00000473829 WIF1Q9Y5W5 379 aa17.28■□□□□ 0.36
PTCD3-210ENST00000473829 PCNX1Q96RV3 2341 aa17.27■□□□□ 0.36
PTCD3-210ENST00000473829 TTC36A6NLP5 189 aa17.27■□□□□ 0.36
PTCD3-210ENST00000473829 FADS1O60427 444 aa17.27■□□□□ 0.36
PTCD3-210ENST00000473829 HPNP05981 417 aa17.27■□□□□ 0.36
PTCD3-210ENST00000473829 ELAVL4P26378 380 aaKnown RBP17.27■□□□□ 0.36
PTCD3-210ENST00000473829 IL12AP29459 219 aa17.27■□□□□ 0.36
PTCD3-210ENST00000473829 EVI2BP34910 448 aa17.27■□□□□ 0.36
PTCD3-210ENST00000473829 CCT3P49368 545 aaKnown RBP17.27■□□□□ 0.36
PTCD3-210ENST00000473829 UFM1P61960 85 aa17.27■□□□□ 0.36
PTCD3-210ENST00000473829 PRR5P85299 388 aa17.27■□□□□ 0.36
PTCD3-210ENST00000473829 LASP1Q14847 261 aaKnown RBP17.27■□□□□ 0.36
PTCD3-210ENST00000473829 LSM12Q3MHD2 195 aaKnown RBP17.27■□□□□ 0.36
PTCD3-210ENST00000473829 SPANXN4Q5MJ08 99 aa17.27■□□□□ 0.36
PTCD3-210ENST00000473829 SPATA19Q7Z5L4 167 aa17.27■□□□□ 0.36
PTCD3-210ENST00000473829 ZAR1Q86SH2 424 aa17.27■□□□□ 0.36
PTCD3-210ENST00000473829 ANKRD46Q86W74 232 aa17.27■□□□□ 0.36
PTCD3-210ENST00000473829 OR8J2Q8NGG1 315 aa17.27■□□□□ 0.36
PTCD3-210ENST00000473829 OR5AK3PQ8NH89 298 aa17.27■□□□□ 0.36
PTCD3-210ENST00000473829 NEIL3Q8TAT5 605 aa17.27■□□□□ 0.36
PTCD3-210ENST00000473829 LRRC8CQ8TDW0 803 aa17.27■□□□□ 0.36
PTCD3-210ENST00000473829 TESCQ96BS2 214 aa17.27■□□□□ 0.36
PTCD3-210ENST00000473829 EXO5Q9H790 373 aa17.27■□□□□ 0.36
PTCD3-210ENST00000473829 NEUROD4Q9HD90 331 aa17.27■□□□□ 0.36
PTCD3-210ENST00000473829 GPATCH2Q9NW75 528 aa17.27■□□□□ 0.36
PTCD3-210ENST00000473829 GPR45Q9Y5Y3 372 aa17.27■□□□□ 0.36
PTCD3-210ENST00000473829 NBPF19A0A087WUL8 3843 aa17.27■□□□□ 0.35
PTCD3-210ENST00000473829 OR14I1A6ND48 311 aa17.26■□□□□ 0.35
PTCD3-210ENST00000473829 E9PLN8 166 aa17.26■□□□□ 0.35
PTCD3-210ENST00000473829 RNASET2O00584 256 aaKnown RBP17.26■□□□□ 0.35
PTCD3-210ENST00000473829 CFLARO15519 480 aa17.26■□□□□ 0.35
PTCD3-210ENST00000473829 SCO2O43819 266 aa17.26■□□□□ 0.35
PTCD3-210ENST00000473829 TRAPPC6AO75865 159 aa17.26■□□□□ 0.35
PTCD3-210ENST00000473829 ESRRAP11474 423 aaPredicted RBP17.26■□□□□ 0.35
PTCD3-210ENST00000473829 SOAT1P35610 550 aa17.26■□□□□ 0.35
PTCD3-210ENST00000473829 KIR3DL1P43629 444 aa17.26■□□□□ 0.35
PTCD3-210ENST00000473829 TP53BP2Q13625 1128 aa17.26■□□□□ 0.35
PTCD3-210ENST00000473829 VPS26BQ4G0F5 336 aa17.26■□□□□ 0.35
PTCD3-210ENST00000473829 GXYLT1Q4G148 440 aa17.26■□□□□ 0.35
PTCD3-210ENST00000473829 EIPR1Q53HC9 387 aa17.26■□□□□ 0.35
PTCD3-210ENST00000473829 NXNQ6DKJ4 435 aa17.26■□□□□ 0.35
PTCD3-210ENST00000473829 OR5M10Q6IEU7 315 aa17.26■□□□□ 0.35
PTCD3-210ENST00000473829 FIGNL1Q6PIW4 674 aa17.26■□□□□ 0.35
PTCD3-210ENST00000473829 CLEC4FQ8N1N0 589 aa17.26■□□□□ 0.35
PTCD3-210ENST00000473829 SFXN5Q8TD22 340 aa17.26■□□□□ 0.35
PTCD3-210ENST00000473829 JADE3Q92613 823 aa17.26■□□□□ 0.35
PTCD3-210ENST00000473829 VKORC1Q9BQB6 163 aa17.26■□□□□ 0.35
PTCD3-210ENST00000473829 INTS9Q9NV88 658 aaKnown RBP17.26■□□□□ 0.35
PTCD3-210ENST00000473829 FBXO34Q9NWN3 711 aa17.26■□□□□ 0.35
PTCD3-210ENST00000473829 FBXL2Q9UKC9 423 aa17.26■□□□□ 0.35
PTCD3-210ENST00000473829 USH1CQ9Y6N9 552 aa17.26■□□□□ 0.35
PTCD3-210ENST00000473829 MED12Q93074 2177 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 PHF3Q92576 2039 aaKnown RBP17.25■□□□□ 0.35
PTCD3-210ENST00000473829 E9PBE3 544 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 KCNK2O95069 426 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 KCNH1O95259 989 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 UTS2O95399 124 aa17.25■□□□□ 0.35
PTCD3-210ENST00000473829 ALOX5P09917 674 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms