RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 MCHR2Q969V1 340 aa4.03□□□□□ -1.76
CLK1-209ENST00000472679 FAF2Q96CS3 445 aa4.03□□□□□ -1.76
CLK1-209ENST00000472679 SAMD8Q96LT4 415 aa4.03□□□□□ -1.76
CLK1-209ENST00000472679 ABCB10Q9NRK6 738 aa4.03□□□□□ -1.76
CLK1-209ENST00000472679 NINJ2Q9NZG7 142 aa4.03□□□□□ -1.76
CLK1-209ENST00000472679 IL17CQ9P0M4 197 aa4.03□□□□□ -1.76
CLK1-209ENST00000472679 DPM3Q9P2X0 92 aa4.03□□□□□ -1.76
CLK1-209ENST00000472679 DUSP12Q9UNI6 340 aa4.03□□□□□ -1.76
CLK1-209ENST00000472679 ZNF256Q9Y2P7 627 aaPredicted RBP4.03□□□□□ -1.76
CLK1-209ENST00000472679 TNFSF11O14788 317 aa4.02□□□□□ -1.77
CLK1-209ENST00000472679 TM9SF1O15321 606 aa4.02□□□□□ -1.77
CLK1-209ENST00000472679 PRKAR2BP31323 418 aa4.02□□□□□ -1.77
CLK1-209ENST00000472679 LYZP61626 148 aa4.02□□□□□ -1.77
CLK1-209ENST00000472679 IL9RQ01113 521 aa4.02□□□□□ -1.77
CLK1-209ENST00000472679 KARSQ15046 597 aaKnown RBP4.02□□□□□ -1.77
CLK1-209ENST00000472679 UBE2V2Q15819 145 aa4.02□□□□□ -1.77
CLK1-209ENST00000472679 CAMK4Q16566 473 aa4.02□□□□□ -1.77
CLK1-209ENST00000472679 GLYR1Q49A26 553 aaPredicted RBP4.02□□□□□ -1.77
CLK1-209ENST00000472679 BTNL3Q6UXE8 466 aa4.02□□□□□ -1.77
CLK1-209ENST00000472679 Q7L0L9 218 aa4.02□□□□□ -1.77
CLK1-209ENST00000472679 C9orf40Q8IXQ3 194 aa4.02□□□□□ -1.77
CLK1-209ENST00000472679 MCOLN2Q8IZK6 566 aa4.02□□□□□ -1.77
CLK1-209ENST00000472679 KDM8Q8N371 416 aa4.02□□□□□ -1.77
CLK1-209ENST00000472679 ARL10Q8N8L6 244 aa4.02□□□□□ -1.77
CLK1-209ENST00000472679 OR56B1Q8NGI3 324 aa4.02□□□□□ -1.77
CLK1-209ENST00000472679 NCLNQ969V3 563 aa4.02□□□□□ -1.77
CLK1-209ENST00000472679 MAPKAP1Q9BPZ7 522 aa4.02□□□□□ -1.77
CLK1-209ENST00000472679 TSSK1BQ9BXA7 367 aa4.02□□□□□ -1.77
CLK1-209ENST00000472679 SOHLH2Q9NX45 425 aa4.02□□□□□ -1.77
CLK1-209ENST00000472679 CELA1Q9UNI1 258 aa4.02□□□□□ -1.77
CLK1-209ENST00000472679 RNF222A6NCQ9 220 aa4.01□□□□□ -1.77
CLK1-209ENST00000472679 JCHAINP01591 159 aa4.01□□□□□ -1.77
CLK1-209ENST00000472679 FUT1P19526 365 aa4.01□□□□□ -1.77
CLK1-209ENST00000472679 ATXN3P54252 364 aaPredicted RBP4.01□□□□□ -1.77
CLK1-209ENST00000472679 ZNF79Q15937 498 aa4.01□□□□□ -1.77
CLK1-209ENST00000472679 PKN2Q16513 984 aaKnown RBP4.01□□□□□ -1.77
CLK1-209ENST00000472679 ISXQ2M1V0 245 aa4.01□□□□□ -1.77
CLK1-209ENST00000472679 TMEM52BQ4KMG9 183 aa4.01□□□□□ -1.77
CLK1-209ENST00000472679 RSBN1Q5VWQ0 802 aaPredicted RBP4.01□□□□□ -1.77
CLK1-209ENST00000472679 MEDAGQ5VYS4 303 aa4.01□□□□□ -1.77
CLK1-209ENST00000472679 SLX4IPQ5VYV7 408 aa4.01□□□□□ -1.77
CLK1-209ENST00000472679 UFSP1Q6NVU6 142 aa4.01□□□□□ -1.77
CLK1-209ENST00000472679 APOBEC3FQ8IUX4 373 aaKnown RBP4.01□□□□□ -1.77
CLK1-209ENST00000472679 ZNF564Q8TBZ8 553 aaPredicted RBP4.01□□□□□ -1.77
CLK1-209ENST00000472679 FCGR1BQ92637 280 aa4.01□□□□□ -1.77
CLK1-209ENST00000472679 TADA1Q96BN2 335 aa4.01□□□□□ -1.77
CLK1-209ENST00000472679 MRPL38Q96DV4 380 aaKnown RBP4.01□□□□□ -1.77
CLK1-209ENST00000472679 DPH7Q9BTV6 452 aa4.01□□□□□ -1.77
CLK1-209ENST00000472679 WRAP53Q9BUR4 548 aaKnown RBP4.01□□□□□ -1.77
CLK1-209ENST00000472679 NMNAT2Q9BZQ4 307 aa4.01□□□□□ -1.77
CLK1-209ENST00000472679 KAT8Q9H7Z6 458 aaKnown RBP4.01□□□□□ -1.77
CLK1-209ENST00000472679 TRPV5Q9NQA5 729 aa4.01□□□□□ -1.77
CLK1-209ENST00000472679 PLSCR3Q9NRY6 295 aa4.01□□□□□ -1.77
CLK1-209ENST00000472679 USP6P35125 1406 aa4.01□□□□□ -1.77
CLK1-209ENST00000472679 GRIN2DO15399 1336 aa4□□□□□ -1.77
CLK1-209ENST00000472679 ABCC4O15439 1325 aa4□□□□□ -1.77
CLK1-209ENST00000472679 IGLV8-61A0A075B6I0 122 aa4□□□□□ -1.77
CLK1-209ENST00000472679 H3BTX0 84 aa4□□□□□ -1.77
CLK1-209ENST00000472679 LGALS8O00214 317 aa4□□□□□ -1.77
CLK1-209ENST00000472679 PPIHO43447 177 aaKnown RBP4□□□□□ -1.77
CLK1-209ENST00000472679 SEC22BO75396 215 aa4□□□□□ -1.77
CLK1-209ENST00000472679 RPA1P27694 616 aa4□□□□□ -1.77
CLK1-209ENST00000472679 GPC3P51654 580 aa4□□□□□ -1.77
CLK1-209ENST00000472679 PRKCEQ02156 737 aa4□□□□□ -1.77
CLK1-209ENST00000472679 TFDP1Q14186 410 aa4□□□□□ -1.77
CLK1-209ENST00000472679 RFTN1Q14699 578 aaPredicted RBP4□□□□□ -1.77
CLK1-209ENST00000472679 DCAF4L1Q3SXM0 396 aa4□□□□□ -1.77
CLK1-209ENST00000472679 ZNF544Q6NX49 715 aa4□□□□□ -1.77
CLK1-209ENST00000472679 CEND1Q8N111 149 aa4□□□□□ -1.77
CLK1-209ENST00000472679 MRPL43Q8N983 215 aaKnown RBP4□□□□□ -1.77
CLK1-209ENST00000472679 CCDC47Q96A33 483 aaKnown RBP4□□□□□ -1.77
CLK1-209ENST00000472679 NUS1Q96E22 293 aa4□□□□□ -1.77
CLK1-209ENST00000472679 ZIM3Q96PE6 472 aa4□□□□□ -1.77
CLK1-209ENST00000472679 KIR2DL4Q99706 377 aa4□□□□□ -1.77
CLK1-209ENST00000472679 ROPN1Q9HAT0 212 aaPredicted RBP4□□□□□ -1.77
CLK1-209ENST00000472679 KLHL21Q9UJP4 597 aa4□□□□□ -1.77
CLK1-209ENST00000472679 RNF103-CHMP3A0A140T963 221 aa3.99□□□□□ -1.77
CLK1-209ENST00000472679 EPOPA6NHQ4 379 aa3.99□□□□□ -1.77
CLK1-209ENST00000472679 SSX5O60225 188 aa3.99□□□□□ -1.77
CLK1-209ENST00000472679 RAMP1O60894 148 aa3.99□□□□□ -1.77
CLK1-209ENST00000472679 PTBP3O95758 552 aaKnown RBP3.99□□□□□ -1.77
CLK1-209ENST00000472679 H2AFZP0C0S5 128 aa3.99□□□□□ -1.77
CLK1-209ENST00000472679 GSTT2P0CG29 244 aa3.99□□□□□ -1.77
CLK1-209ENST00000472679 GSTT2BP0CG30 244 aa3.99□□□□□ -1.77
CLK1-209ENST00000472679 AZU1P20160 251 aa3.99□□□□□ -1.77
CLK1-209ENST00000472679 PLOD1Q02809 727 aaPredicted RBP3.99□□□□□ -1.77
CLK1-209ENST00000472679 CYP51A1Q16850 503 aa3.99□□□□□ -1.77
CLK1-209ENST00000472679 CYBRD1Q53TN4 286 aa3.99□□□□□ -1.77
CLK1-209ENST00000472679 ZCCHC12Q6PEW1 402 aa3.99□□□□□ -1.77
CLK1-209ENST00000472679 ZNF619Q8N2I2 560 aa3.99□□□□□ -1.77
CLK1-209ENST00000472679 CSNK1A1LQ8N752 337 aa3.99□□□□□ -1.77
CLK1-209ENST00000472679 FAM71CQ8NEG0 241 aa3.99□□□□□ -1.77
CLK1-209ENST00000472679 C18orf25Q96B23 403 aaPredicted RBP3.99□□□□□ -1.77
CLK1-209ENST00000472679 GPN2Q9H9Y4 310 aaPredicted RBP3.99□□□□□ -1.77
CLK1-209ENST00000472679 YAE1D1Q9NRH1 226 aa3.99□□□□□ -1.77
CLK1-209ENST00000472679 APOBEC3BQ9UH17 382 aaKnown RBP3.99□□□□□ -1.77
CLK1-209ENST00000472679 CA5BQ9Y2D0 317 aa3.99□□□□□ -1.77
CLK1-209ENST00000472679 ZSCAN5BA6NJL1 495 aa3.98□□□□□ -1.77
CLK1-209ENST00000472679 ZFP92A6NM28 416 aa3.98□□□□□ -1.77
CLK1-209ENST00000472679 PDXKO00764 312 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms