RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 STAC2Q6ZMT1 411 aa2.9□□□□□ -1.95
PTCD3-209ENST00000472044 CATSPER4Q7RTX7 472 aa2.9□□□□□ -1.95
PTCD3-209ENST00000472044 RFESDQ8TAC1 157 aa2.9□□□□□ -1.95
PTCD3-209ENST00000472044 CCDC110Q8TBZ0 833 aa2.9□□□□□ -1.95
PTCD3-209ENST00000472044 TESK2Q96S53 571 aa2.9□□□□□ -1.95
PTCD3-209ENST00000472044 GPA33Q99795 319 aa2.9□□□□□ -1.95
PTCD3-209ENST00000472044 HCAR1Q9BXC0 346 aa2.9□□□□□ -1.95
PTCD3-209ENST00000472044 MRPL13Q9BYD1 178 aaKnown RBP2.9□□□□□ -1.95
PTCD3-209ENST00000472044 OPN3Q9H1Y3 402 aaPredicted RBP2.9□□□□□ -1.95
PTCD3-209ENST00000472044 COG4Q9H9E3 785 aa2.9□□□□□ -1.95
PTCD3-209ENST00000472044 POLD4Q9HCU8 107 aa2.9□□□□□ -1.95
PTCD3-209ENST00000472044 PRODH2Q9UF12 536 aa2.9□□□□□ -1.95
PTCD3-209ENST00000472044 ATP6V1HQ9UI12 483 aa2.9□□□□□ -1.95
PTCD3-209ENST00000472044 ZNF107Q9UII5 783 aaPredicted RBP2.9□□□□□ -1.95
PTCD3-209ENST00000472044 NAALAD2Q9Y3Q0 740 aa2.9□□□□□ -1.95
PTCD3-209ENST00000472044 A0A087WZY1 265 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 A0A1B0GUL7 405 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 RGSL1A5PLK6 1076 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 CCT8L1PA6NM43 557 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 G3V3Y1 287 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 LANCL1O43813 399 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 TSC22D2O75157 780 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 KRT6BP04259 564 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 CA3P07451 260 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 THRBP10828 461 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 H2AFXP16104 143 aaPredicted RBP2.89□□□□□ -1.95
PTCD3-209ENST00000472044 SDC1P18827 310 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 USP6P35125 1406 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 ADRA1AP35348 466 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 KRT6CP48668 564 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 FNTAP49354 379 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 CAMK4Q16566 473 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 ZNF239Q16600 458 aaKnown RBP2.89□□□□□ -1.95
PTCD3-209ENST00000472044 SLC22A6Q4U2R8 563 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 ZNF311Q5JNZ3 666 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 CGB2Q6NT52 195 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 NIPAL3Q6P499 406 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 PAMR1Q6UXH9 720 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 Q7L0L9 218 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 LHFPL4Q7Z7J7 247 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 HPS6Q86YV9 775 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 GCNT2Q8N0V5 402 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 LINC00612Q8N6U2 182 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 OR5AU1Q8NGC0 362 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 RHOXF1Q8NHV9 184 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 SELENOMQ8WWX9 145 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 PPP1R16AQ96I34 528 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 ELMO2Q96JJ3 720 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 CCT8L2Q96SF2 557 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 TBCDQ9BTW9 1192 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 TBC1D10AQ9BXI6 508 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 COMMD4Q9H0A8 199 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 GPN2Q9H9Y4 310 aaPredicted RBP2.89□□□□□ -1.95
PTCD3-209ENST00000472044 MEPEQ9NQ76 525 aaPredicted RBP2.89□□□□□ -1.95
PTCD3-209ENST00000472044 AGPAT5Q9NUQ2 364 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 ELOVL2Q9NXB9 296 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 EHFQ9NZC4 300 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 DUSP12Q9UNI6 340 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 AURKCQ9UQB9 309 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 ATP8B3O60423 1300 aa2.89□□□□□ -1.95
PTCD3-209ENST00000472044 TP53BP1Q12888 1972 aaPredicted RBP2.89□□□□□ -1.95
PTCD3-209ENST00000472044 CARMIL1Q5VZK9 1371 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 IGHV3-35A0A0C4DH35 117 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 EFCAB7A8K855 629 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 ERI2A8K979 691 aaKnown RBP2.88□□□□□ -1.95
PTCD3-209ENST00000472044 A8MX80 341 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 PPIHO43447 177 aaKnown RBP2.88□□□□□ -1.95
PTCD3-209ENST00000472044 SCGB2A1O75556 95 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 OR4F21O95013 312 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 JCHAINP01591 159 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 CHRNA1P02708 482 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 THY1P04216 161 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 IGFBP1P08833 259 aaPredicted RBP2.88□□□□□ -1.95
PTCD3-209ENST00000472044 ALPIP09923 528 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 GSTT2P0CG29 244 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 GSTT2BP0CG30 244 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 UMPSP11172 480 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 BCKDHAP12694 445 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 PGAM2P15259 253 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 MDH1P40925 334 aaKnown RBP2.88□□□□□ -1.95
PTCD3-209ENST00000472044 PTGFRP43088 359 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 IST1P53990 364 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 PRKCEQ02156 737 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 IL18R1Q13478 541 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 TGIF1Q15583 401 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 UBE2V2Q15819 145 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 CYP51A1Q16850 503 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 VITQ6UXI7 678 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 C2orf66Q6UXQ4 117 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 PARGQ86W56 976 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 UNC5CLQ8IV45 518 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 NAXDQ8IW45 347 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 EFCAB13Q8IY85 973 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 Q8N9G6 341 aaPredicted RBP2.88□□□□□ -1.95
PTCD3-209ENST00000472044 STKLD1Q8NE28 680 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 KLHL30-AS1Q8NEE0 82 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 GTSF1Q8WW33 167 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 C1orf123Q9NWV4 160 aa2.88□□□□□ -1.95
PTCD3-209ENST00000472044 EPS15L1Q9UBC2 864 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms