RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 CHMP24386 653 aa20.43■□□□□ 0.86
C9orf3-213ENST00000471978 EVI2BP34910 448 aa20.43■□□□□ 0.86
C9orf3-213ENST00000471978 CLDN18P56856 261 aa20.43■□□□□ 0.86
C9orf3-213ENST00000471978 SORDQ00796 357 aa20.43■□□□□ 0.86
C9orf3-213ENST00000471978 IKBIPQ70UQ0 350 aa20.43■□□□□ 0.86
C9orf3-213ENST00000471978 LINC01560Q8TB33 94 aa20.43■□□□□ 0.86
C9orf3-213ENST00000471978 AMDHD1Q96NU7 426 aa20.43■□□□□ 0.86
C9orf3-213ENST00000471978 DDX18Q9NVP1 670 aaKnown RBP20.43■□□□□ 0.86
C9orf3-213ENST00000471978 CLCF1Q9UBD9 225 aa20.43■□□□□ 0.86
C9orf3-213ENST00000471978 COPEO14579 308 aa20.42■□□□□ 0.86
C9orf3-213ENST00000471978 SEC22BO75396 215 aa20.42■□□□□ 0.86
C9orf3-213ENST00000471978 ZNF708P17019 499 aa20.42■□□□□ 0.86
C9orf3-213ENST00000471978 DSCR4P56555 118 aaPredicted RBP20.42■□□□□ 0.86
C9orf3-213ENST00000471978 GAB1Q13480 694 aa20.42■□□□□ 0.86
C9orf3-213ENST00000471978 DECR1Q16698 335 aa20.42■□□□□ 0.86
C9orf3-213ENST00000471978 FBXW10Q5XX13 1052 aa20.42■□□□□ 0.86
C9orf3-213ENST00000471978 TDRPQ86YL5 185 aa20.42■□□□□ 0.86
C9orf3-213ENST00000471978 OR2L13Q8N349 312 aa20.42■□□□□ 0.86
C9orf3-213ENST00000471978 EIF1ADQ8N9N8 165 aaKnown RBP20.42■□□□□ 0.86
C9orf3-213ENST00000471978 ELP4Q96EB1 424 aa20.42■□□□□ 0.86
C9orf3-213ENST00000471978 FOXC2Q99958 501 aa20.42■□□□□ 0.86
C9orf3-213ENST00000471978 RBM24Q9BX46 236 aaKnown RBP20.42■□□□□ 0.86
C9orf3-213ENST00000471978 ACBD3Q9H3P7 528 aa20.42■□□□□ 0.86
C9orf3-213ENST00000471978 DSN1Q9H410 356 aa20.42■□□□□ 0.86
C9orf3-213ENST00000471978 PPCSQ9HAB8 311 aa20.42■□□□□ 0.86
C9orf3-213ENST00000471978 Q9N2J8 555 aa20.42■□□□□ 0.86
C9orf3-213ENST00000471978 EDARQ9UNE0 448 aa20.42■□□□□ 0.86
C9orf3-213ENST00000471978 CCL27Q9Y4X3 112 aa20.42■□□□□ 0.86
C9orf3-213ENST00000471978 FADS1O60427 444 aa20.41■□□□□ 0.86
C9orf3-213ENST00000471978 PSMG1O95456 288 aa20.41■□□□□ 0.86
C9orf3-213ENST00000471978 ZNHIT3Q15649 155 aaPredicted RBP20.41■□□□□ 0.86
C9orf3-213ENST00000471978 CLEC6AQ6EIG7 209 aa20.41■□□□□ 0.86
C9orf3-213ENST00000471978 LUZP2Q86TE4 346 aa20.41■□□□□ 0.86
C9orf3-213ENST00000471978 GRAMD2AQ8IUY3 354 aa20.41■□□□□ 0.86
C9orf3-213ENST00000471978 GCNT2Q8N0V5 402 aa20.41■□□□□ 0.86
C9orf3-213ENST00000471978 FADS6Q8N9I5 356 aa20.41■□□□□ 0.86
C9orf3-213ENST00000471978 EPS8L3Q8TE67 593 aaKnown RBP20.41■□□□□ 0.86
C9orf3-213ENST00000471978 METTL2AQ96IZ6 378 aaKnown RBP20.41■□□□□ 0.86
C9orf3-213ENST00000471978 EGLN2Q96KS0 407 aa20.41■□□□□ 0.86
C9orf3-213ENST00000471978 CXXC4Q9H2H0 198 aa20.41■□□□□ 0.86
C9orf3-213ENST00000471978 SDHAF3Q9NRP4 125 aa20.41■□□□□ 0.86
C9orf3-213ENST00000471978 FLRT3Q9NZU0 649 aa20.41■□□□□ 0.86
C9orf3-213ENST00000471978 ABCG2Q9UNQ0 655 aa20.41■□□□□ 0.86
C9orf3-213ENST00000471978 PLEKHA6Q9Y2H5 1048 aa20.41■□□□□ 0.86
C9orf3-213ENST00000471978 MPDZO75970 2070 aa20.4■□□□□ 0.86
C9orf3-213ENST00000471978 KRT4P19013 534 aa20.4■□□□□ 0.86
C9orf3-213ENST00000471978 DNASE1P24855 282 aa20.4■□□□□ 0.86
C9orf3-213ENST00000471978 CPA2P48052 419 aa20.4■□□□□ 0.86
C9orf3-213ENST00000471978 B3GALT5-AS1P59052 145 aa20.4■□□□□ 0.86
C9orf3-213ENST00000471978 STX5Q13190 355 aa20.4■□□□□ 0.86
C9orf3-213ENST00000471978 KIAA0040Q15053 153 aa20.4■□□□□ 0.86
C9orf3-213ENST00000471978 BCL2A1Q16548 175 aa20.4■□□□□ 0.86
C9orf3-213ENST00000471978 LIPMQ5VYY2 423 aa20.4■□□□□ 0.86
C9orf3-213ENST00000471978 C4orf33Q8N1A6 199 aa20.4■□□□□ 0.86
C9orf3-213ENST00000471978 OR2M3Q8NG83 312 aa20.4■□□□□ 0.86
C9orf3-213ENST00000471978 GALNT8Q9NY28 637 aa20.4■□□□□ 0.86
C9orf3-213ENST00000471978 MED11Q9P086 117 aa20.4■□□□□ 0.86
C9orf3-213ENST00000471978 MRTO4Q9UKD2 239 aaKnown RBP20.4■□□□□ 0.86
C9orf3-213ENST00000471978 PTGDR2Q9Y5Y4 395 aa20.4■□□□□ 0.86
C9orf3-213ENST00000471978 SLC28A1O00337 649 aa20.39■□□□□ 0.85
C9orf3-213ENST00000471978 RGS14O43566 566 aa20.39■□□□□ 0.85
C9orf3-213ENST00000471978 IL33O95760 270 aa20.39■□□□□ 0.85
C9orf3-213ENST00000471978 TGM6O95932 706 aa20.39■□□□□ 0.85
C9orf3-213ENST00000471978 HK1P19367 917 aa20.39■□□□□ 0.85
C9orf3-213ENST00000471978 PRPH2P23942 346 aa20.39■□□□□ 0.85
C9orf3-213ENST00000471978 RFX3P48380 749 aa20.39■□□□□ 0.85
C9orf3-213ENST00000471978 CLK3P49761 638 aaKnown RBP20.39■□□□□ 0.85
C9orf3-213ENST00000471978 CHMP1BQ7LBR1 199 aa20.39■□□□□ 0.85
C9orf3-213ENST00000471978 C10orf107Q8IVU9 208 aa20.39■□□□□ 0.85
C9orf3-213ENST00000471978 GFM2Q969S9 779 aaKnown RBP20.39■□□□□ 0.85
C9orf3-213ENST00000471978 LMF2Q9BU23 707 aaKnown RBP20.39■□□□□ 0.85
C9orf3-213ENST00000471978 PIGMQ9H3S5 423 aa20.39■□□□□ 0.85
C9orf3-213ENST00000471978 LRTM1Q9HBL6 345 aa20.39■□□□□ 0.85
C9orf3-213ENST00000471978 C1orf109Q9NX04 203 aa20.39■□□□□ 0.85
C9orf3-213ENST00000471978 FAM120CQ9NX05 1096 aaKnown RBP20.39■□□□□ 0.85
C9orf3-213ENST00000471978 PRRC2AP48634 2157 aaKnown RBP20.38■□□□□ 0.85
C9orf3-213ENST00000471978 AZIN1O14977 448 aa20.38■□□□□ 0.85
C9orf3-213ENST00000471978 HCRTR2O43614 444 aa20.38■□□□□ 0.85
C9orf3-213ENST00000471978 PEPDP12955 493 aa20.38■□□□□ 0.85
C9orf3-213ENST00000471978 PSMD4P55036 377 aaKnown RBP20.38■□□□□ 0.85
C9orf3-213ENST00000471978 EEF1A1P68104 462 aaKnown RBP20.38■□□□□ 0.85
C9orf3-213ENST00000471978 HSPB3Q12988 150 aa20.38■□□□□ 0.85
C9orf3-213ENST00000471978 EEF1A1P5Q5VTE0 462 aa20.38■□□□□ 0.85
C9orf3-213ENST00000471978 RAET1LQ5VY80 246 aa20.38■□□□□ 0.85
C9orf3-213ENST00000471978 ZNF551Q7Z340 670 aaPredicted RBP20.38■□□□□ 0.85
C9orf3-213ENST00000471978 P4HA3Q7Z4N8 544 aa20.38■□□□□ 0.85
C9orf3-213ENST00000471978 UBQLNLQ8IYU4 475 aa20.38■□□□□ 0.85
C9orf3-213ENST00000471978 CHDHQ8NE62 594 aaPredicted RBP20.38■□□□□ 0.85
C9orf3-213ENST00000471978 DUSP19Q8WTR2 217 aa20.38■□□□□ 0.85
C9orf3-213ENST00000471978 YIPF4Q9BSR8 244 aa20.38■□□□□ 0.85
C9orf3-213ENST00000471978 RTN4RQ9BZR6 473 aa20.38■□□□□ 0.85
C9orf3-213ENST00000471978 PTGES2Q9H7Z7 377 aa20.38■□□□□ 0.85
C9orf3-213ENST00000471978 C3orf14Q9HBI5 128 aa20.38■□□□□ 0.85
C9orf3-213ENST00000471978 MID2Q9UJV3 735 aa20.38■□□□□ 0.85
C9orf3-213ENST00000471978 FIS1Q9Y3D6 152 aa20.38■□□□□ 0.85
C9orf3-213ENST00000471978 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.37■□□□□ 0.85
C9orf3-213ENST00000471978 NPIPB8E9PQR5 432 aa20.37■□□□□ 0.85
C9orf3-213ENST00000471978 PDPK1O15530 556 aa20.37■□□□□ 0.85
C9orf3-213ENST00000471978 TNFSF13O75888 250 aa20.37■□□□□ 0.85
C9orf3-213ENST00000471978 IFI6P09912 130 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms