RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 WIF1Q9Y5W5 379 aa17.12■□□□□ 0.33
COMMD1-207ENST00000471704 ABCA4P78363 2273 aa17.12■□□□□ 0.33
COMMD1-207ENST00000471704 PRRC2AP48634 2157 aaKnown RBP17.11■□□□□ 0.33
COMMD1-207ENST00000471704 AKAP10O43572 662 aa17.11■□□□□ 0.33
COMMD1-207ENST00000471704 TBX19O60806 448 aa17.11■□□□□ 0.33
COMMD1-207ENST00000471704 ABCB7O75027 752 aa17.11■□□□□ 0.33
COMMD1-207ENST00000471704 SLITRK5O94991 958 aa17.11■□□□□ 0.33
COMMD1-207ENST00000471704 ZWINTO95229 277 aa17.11■□□□□ 0.33
COMMD1-207ENST00000471704 BPGMP07738 259 aa17.11■□□□□ 0.33
COMMD1-207ENST00000471704 FRKP42685 505 aaPredicted RBP17.11■□□□□ 0.33
COMMD1-207ENST00000471704 GALNTL6Q49A17 601 aa17.11■□□□□ 0.33
COMMD1-207ENST00000471704 SH2D4BQ5SQS7 431 aa17.11■□□□□ 0.33
COMMD1-207ENST00000471704 NSUN5P2Q63ZY6 315 aa17.11■□□□□ 0.33
COMMD1-207ENST00000471704 DDIASQ8IXT1 998 aa17.11■□□□□ 0.33
COMMD1-207ENST00000471704 PM20D2Q8IYS1 436 aa17.11■□□□□ 0.33
COMMD1-207ENST00000471704 NRGNQ92686 78 aa17.11■□□□□ 0.33
COMMD1-207ENST00000471704 RTN4RQ9BZR6 473 aa17.11■□□□□ 0.33
COMMD1-207ENST00000471704 REEP4Q9H6H4 257 aa17.11■□□□□ 0.33
COMMD1-207ENST00000471704 DDX18Q9NVP1 670 aaKnown RBP17.11■□□□□ 0.33
COMMD1-207ENST00000471704 ZDHHC2Q9UIJ5 367 aa17.11■□□□□ 0.33
COMMD1-207ENST00000471704 CD8B2A6NJW9 211 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 DVL2O14641 736 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 PDPK1O15530 556 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 CBR3O75828 277 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 CHEK2O96017 543 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 IFI6P09912 130 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 BCKDHAP12694 445 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 CD1EP15812 388 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 IL12BP29460 328 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 PEX19P40855 299 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 MAP3K8P41279 467 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 KIR2DL3P43628 341 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 ASCL1P50553 236 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 ZNF136P52737 540 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 HSPB3Q12988 150 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 GAB1Q13480 694 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 SNTB1Q13884 538 aaKnown RBP17.1■□□□□ 0.33
COMMD1-207ENST00000471704 EFR3AQ14156 821 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 SF3B4Q15427 424 aaKnown RBP eCLIP17.1■□□□□ 0.33
COMMD1-207ENST00000471704 OR5M10Q6IEU7 315 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 PLCZ1Q86YW0 608 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 ZZZ3Q8IYH5 903 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 ABTB1Q969K4 478 aaPredicted RBP17.1■□□□□ 0.33
COMMD1-207ENST00000471704 LMF2Q9BU23 707 aaKnown RBP17.1■□□□□ 0.33
COMMD1-207ENST00000471704 CRIM1Q9NZV1 1036 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 RAB21Q9UL25 225 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 CAMK2AQ9UQM7 478 aa17.1■□□□□ 0.33
COMMD1-207ENST00000471704 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.09■□□□□ 0.33
COMMD1-207ENST00000471704 FADS1O60427 444 aa17.09■□□□□ 0.33
COMMD1-207ENST00000471704 BMP5P22003 454 aa17.09■□□□□ 0.33
COMMD1-207ENST00000471704 GRK2P25098 689 aa17.09■□□□□ 0.33
COMMD1-207ENST00000471704 EVI2BP34910 448 aa17.09■□□□□ 0.33
COMMD1-207ENST00000471704 GFRA1P56159 465 aa17.09■□□□□ 0.33
COMMD1-207ENST00000471704 PSPHP78330 225 aa17.09■□□□□ 0.33
COMMD1-207ENST00000471704 NUDT8Q8WV74 236 aa17.09■□□□□ 0.33
COMMD1-207ENST00000471704 HOXB13Q92826 284 aaPredicted RBP17.09■□□□□ 0.33
COMMD1-207ENST00000471704 RNASE6Q93091 150 aaKnown RBP17.09■□□□□ 0.33
COMMD1-207ENST00000471704 ZBTB9Q96C00 473 aa17.09■□□□□ 0.33
COMMD1-207ENST00000471704 GIMAP5Q96F15 307 aa17.09■□□□□ 0.33
COMMD1-207ENST00000471704 PKNOX2Q96KN3 472 aa17.09■□□□□ 0.33
COMMD1-207ENST00000471704 CALHM2Q9HA72 323 aa17.09■□□□□ 0.33
COMMD1-207ENST00000471704 EML4Q9HC35 981 aaKnown RBP17.09■□□□□ 0.33
COMMD1-207ENST00000471704 DNAJB12Q9NXW2 375 aaKnown RBP17.09■□□□□ 0.33
COMMD1-207ENST00000471704 CBLCQ9ULV8 474 aa17.09■□□□□ 0.33
COMMD1-207ENST00000471704 TMED5Q9Y3A6 229 aa17.09■□□□□ 0.33
COMMD1-207ENST00000471704 OR10H1Q9Y4A9 318 aa17.09■□□□□ 0.33
COMMD1-207ENST00000471704 MED12LQ86YW9 2145 aa17.08■□□□□ 0.33
COMMD1-207ENST00000471704 GXYLT2A0PJZ3 443 aa17.08■□□□□ 0.32
COMMD1-207ENST00000471704 MBD3L4A6NDZ8 208 aaPredicted RBP17.08■□□□□ 0.32
COMMD1-207ENST00000471704 MBD3L3A6NE82 208 aaPredicted RBP17.08■□□□□ 0.32
COMMD1-207ENST00000471704 MBD3L5A6NJ08 208 aaPredicted RBP17.08■□□□□ 0.32
COMMD1-207ENST00000471704 ACTL6AO96019 429 aa17.08■□□□□ 0.32
COMMD1-207ENST00000471704 IL2RAP01589 272 aa17.08■□□□□ 0.32
COMMD1-207ENST00000471704 IGKV1D-16P01601 117 aa17.08■□□□□ 0.32
COMMD1-207ENST00000471704 EFNA1P20827 205 aaPredicted RBP17.08■□□□□ 0.32
COMMD1-207ENST00000471704 UQCRC1P31930 480 aa17.08■□□□□ 0.32
COMMD1-207ENST00000471704 KRT20P35900 424 aa17.08■□□□□ 0.32
COMMD1-207ENST00000471704 SERPINB5P36952 375 aa17.08■□□□□ 0.32
COMMD1-207ENST00000471704 ART1P52961 327 aa17.08■□□□□ 0.32
COMMD1-207ENST00000471704 IST1P53990 364 aa17.08■□□□□ 0.32
COMMD1-207ENST00000471704 KRT71Q3SY84 523 aa17.08■□□□□ 0.32
COMMD1-207ENST00000471704 CYP27C1Q4G0S4 372 aa17.08■□□□□ 0.32
COMMD1-207ENST00000471704 EXOC3L1Q86VI1 746 aa17.08■□□□□ 0.32
COMMD1-207ENST00000471704 MBD3L2Q8NHZ7 208 aaPredicted RBP17.08■□□□□ 0.32
COMMD1-207ENST00000471704 ZPLD1Q8TCW7 415 aa17.08■□□□□ 0.32
COMMD1-207ENST00000471704 PPCDCQ96CD2 204 aa17.08■□□□□ 0.32
COMMD1-207ENST00000471704 G6PC3Q9BUM1 346 aa17.08■□□□□ 0.32
COMMD1-207ENST00000471704 ZNF395Q9H8N7 513 aaPredicted RBP17.08■□□□□ 0.32
COMMD1-207ENST00000471704 ITM2AO43736 263 aa17.07■□□□□ 0.32
COMMD1-207ENST00000471704 SCO2O43819 266 aa17.07■□□□□ 0.32
COMMD1-207ENST00000471704 ZIC3O60481 467 aa17.07■□□□□ 0.32
COMMD1-207ENST00000471704 PEX11AO75192 247 aa17.07■□□□□ 0.32
COMMD1-207ENST00000471704 SKAP2O75563 359 aaPredicted RBP17.07■□□□□ 0.32
COMMD1-207ENST00000471704 LYPLA1O75608 230 aaPredicted RBP17.07■□□□□ 0.32
COMMD1-207ENST00000471704 CPN1P15169 458 aa17.07■□□□□ 0.32
COMMD1-207ENST00000471704 SRD5A2P31213 254 aa17.07■□□□□ 0.32
COMMD1-207ENST00000471704 TNFAIP8L3Q5GJ75 292 aa17.07■□□□□ 0.32
COMMD1-207ENST00000471704 PLXDC2Q6UX71 529 aa17.07■□□□□ 0.32
COMMD1-207ENST00000471704 FADS6Q8N9I5 356 aa17.07■□□□□ 0.32
COMMD1-207ENST00000471704 OR14L1PQ8NHC6 308 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms