RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 SECISBP2Q96T21 854 aaKnown RBP8.11□□□□□ -1.11
CD47-204ENST00000471694 DNAJB9Q9UBS3 223 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 PRAMEF33A0A0G2JMD5 474 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 H7C2Y5 167 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 H7C417 338 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 PRAMEF10O60809 474 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 IL9P15248 144 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 RPS23P62266 143 aaKnown RBP8.11□□□□□ -1.11
CD47-204ENST00000471694 MBTPS1Q14703 1052 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 SNX29P2Q8IUI4 249 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 UMODL1-AS1Q8N2C9 162 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 KLHDC9Q8NEP7 349 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 MSI2Q96DH6 328 aaKnown RBP8.11□□□□□ -1.11
CD47-204ENST00000471694 S100A16Q96FQ6 103 aaKnown RBP8.11□□□□□ -1.11
CD47-204ENST00000471694 CCDC74BQ96LY2 380 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 OR4K3Q96R72 315 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 C1QTNF6Q9BXI9 259 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 SLCO1B3Q9NPD5 702 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 DNAJC25-GNG10A0A024R161 153 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 TNFRSF10AO00220 468 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 ITGBL1O95965 494 aaPredicted RBP8.1□□□□□ -1.11
CD47-204ENST00000471694 CHMP24386 653 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 CLDN17P56750 224 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 RPP30P78346 268 aaKnown RBP8.1□□□□□ -1.11
CD47-204ENST00000471694 FOLH1Q04609 750 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 DYRK1AQ13627 763 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 GNMTQ14749 295 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 SLC36A2Q495M3 483 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 CDONQ4KMG0 1287 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 OGFRL1Q5TC84 451 aaPredicted RBP8.1□□□□□ -1.11
CD47-204ENST00000471694 ANKRD33Q7Z3H0 272 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.1□□□□□ -1.11
CD47-204ENST00000471694 ISG20Q96AZ6 181 aaKnown RBP8.1□□□□□ -1.11
CD47-204ENST00000471694 SARAFQ96BY9 339 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 SLC6A7Q99884 636 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 FBXL3Q9UKT7 428 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 PLEKHM1Q9Y4G2 1056 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 SRPX2O60687 465 aaPredicted RBP8.1□□□□□ -1.11
CD47-204ENST00000471694 DEFA4P12838 97 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 S100A1P23297 94 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 CRABP1P29762 137 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 MAGEA3P43357 314 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 RORCP51449 518 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 SLC10A1Q14973 349 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 CNN3Q15417 329 aaKnown RBP8.1□□□□□ -1.11
CD47-204ENST00000471694 NHSL2Q5HYW2 709 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 TMEM214Q6NUQ4 689 aaKnown RBP8.1□□□□□ -1.11
CD47-204ENST00000471694 OR2T33Q8NG76 320 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 CASTOR1Q8WTX7 329 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 MRGPRX2Q96LB1 330 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 VSX1Q9NZR4 365 aaPredicted RBP8.1□□□□□ -1.11
CD47-204ENST00000471694 LHX6Q9UPM6 363 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 TP53TG5Q9Y2B4 290 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 NFAT5O94916 1531 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 TLCD2A6NGC4 264 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 TRAPPC2LH3BP13 241 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 RNASET2O00584 256 aaKnown RBP8.1□□□□□ -1.11
CD47-204ENST00000471694 EIF5AP63241 154 aaKnown RBP8.1□□□□□ -1.11
CD47-204ENST00000471694 KCNC4Q03721 635 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 ZNF92Q03936 586 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 HLA-BQ31612 363 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 TMEM69Q5SWH9 247 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 LAIR1Q6GTX8 287 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 PAPD4Q6PIY7 484 aaKnown RBP8.1□□□□□ -1.11
CD47-204ENST00000471694 ZBTB46Q86UZ6 589 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 PTRH1Q86Y79 214 aaKnown RBP8.1□□□□□ -1.11
CD47-204ENST00000471694 FBXL6Q8N531 539 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 OR51G2Q8NGK0 314 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 WDR83Q9BRX9 315 aaKnown RBP8.1□□□□□ -1.11
CD47-204ENST00000471694 MENTQ9BUN1 341 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 RNF32Q9H0A6 362 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 POPDC3Q9HBV1 291 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 SMPD3Q9NY59 655 aaPredicted RBP8.1□□□□□ -1.11
CD47-204ENST00000471694 CBLCQ9ULV8 474 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 D6RAR5 112 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 ADAM12O43184 909 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 ALOX12BO75342 701 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 CLPXO76031 633 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 IFNA5P01569 189 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 HOXA9P31269 272 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 TSFMP43897 325 aaKnown RBP8.1□□□□□ -1.11
CD47-204ENST00000471694 GPR4P46093 362 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 CES4AQ5XG92 561 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 C16orf78Q8WTQ4 265 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 C15orf40Q8WUR7 153 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 SMAD6O43541 496 aaKnown RBP8.1□□□□□ -1.11
CD47-204ENST00000471694 AIREO43918 545 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 MAFKO60675 156 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 CNIH1O95406 144 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 FOXN2P32314 431 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 SOX3P41225 446 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 EXOSC7Q15024 291 aaKnown RBP8.1□□□□□ -1.11
CD47-204ENST00000471694 ARHGAP11AQ6P4F7 1023 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 C19orf48Q6RUI8 117 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 RPS27LQ71UM5 84 aaKnown RBP8.1□□□□□ -1.11
CD47-204ENST00000471694 KLBQ86Z14 1044 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 PYURFQ96I23 114 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 FBXL20Q96IG2 436 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 C12orf4Q9NQ89 552 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 CXXC1Q9P0U4 656 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms