RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 STACQ99469 402 aa16.27■□□□□ 0.2
HSPG2-208ENST00000471322 PELOQ9BRX2 385 aaKnown RBP16.27■□□□□ 0.2
HSPG2-208ENST00000471322 PINK1Q9BXM7 581 aa16.27■□□□□ 0.2
HSPG2-208ENST00000471322 PIGUQ9H490 435 aa16.27■□□□□ 0.2
HSPG2-208ENST00000471322 FANCEQ9HB96 536 aa16.27■□□□□ 0.2
HSPG2-208ENST00000471322 PRTFDC1Q9NRG1 225 aa16.27■□□□□ 0.2
HSPG2-208ENST00000471322 CUTCQ9NTM9 273 aa16.27■□□□□ 0.2
HSPG2-208ENST00000471322 MAT2BQ9NZL9 334 aa16.27■□□□□ 0.2
HSPG2-208ENST00000471322 KIF17Q9P2E2 1029 aa16.27■□□□□ 0.2
HSPG2-208ENST00000471322 TMEFF2Q9UIK5 374 aaPredicted RBP16.27■□□□□ 0.2
HSPG2-208ENST00000471322 SLC9A8Q9Y2E8 581 aa16.27■□□□□ 0.2
HSPG2-208ENST00000471322 TESMINQ9Y4I5 508 aa16.27■□□□□ 0.2
HSPG2-208ENST00000471322 PRAMEF25A6NGN4 478 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 STMND1H3BQB6 276 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 SLC16A6O15403 523 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 RRP8O43159 456 aaKnown RBP16.27■□□□□ 0.19
HSPG2-208ENST00000471322 UGT2B11O75310 529 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 AK1P00568 194 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 ITGAMP11215 1152 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 ANXA8P13928 327 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 MGAT2Q10469 447 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 CLN3Q13286 438 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 TTC33Q6PID6 262 aaPredicted RBP16.27■□□□□ 0.19
HSPG2-208ENST00000471322 MED25Q71SY5 747 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 VASH2Q86V25 355 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 SPACA3Q8IXA5 215 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 ATG16L2Q8NAA4 619 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 SLC16A11Q8NCK7 471 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 OR1L3Q8NH93 324 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 SLC9A6Q92581 669 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 PMM1Q92871 262 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 FKBP10Q96AY3 582 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 FBXL20Q96IG2 436 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 MBOAT4Q96T53 435 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 MTHFD2LQ9H903 347 aaPredicted RBP16.27■□□□□ 0.19
HSPG2-208ENST00000471322 ANKRA2Q9H9E1 313 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 DUSP22Q9NRW4 184 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 PCDHGB5Q9Y5G0 923 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 KCNE3Q9Y6H6 103 aa16.27■□□□□ 0.19
HSPG2-208ENST00000471322 SCN3AQ9NY46 2000 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 H3BMH7 237 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 H3BNH8 94 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 SYT5O00445 386 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 ZNF749O43361 778 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 SMNDC1O75940 238 aaKnown RBP eCLIP16.26■□□□□ 0.19
HSPG2-208ENST00000471322 ALPPP05187 535 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 FGF5P12034 268 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 DAPP51397 102 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 KCNAB2Q13303 367 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 SERTAD2Q14140 314 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 ARHGAP11BQ3KRB8 267 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 EXOSC6Q5RKV6 272 aaKnown RBP16.26■□□□□ 0.19
HSPG2-208ENST00000471322 C19orf48Q6RUI8 117 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 TIPARPQ7Z3E1 657 aaKnown RBP16.26■□□□□ 0.19
HSPG2-208ENST00000471322 ZNF605Q86T29 641 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 VWA5B2Q8N398 1253 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 OR4C15Q8NGM1 316 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 OR51Q1Q8NH59 317 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 CRELD1Q96HD1 420 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 NDC1Q9BTX1 674 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 MRPS26Q9BYN8 205 aaKnown RBP16.26■□□□□ 0.19
HSPG2-208ENST00000471322 SLC38A1Q9H2H9 487 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 KCND3Q9UK17 655 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 SLC13A4Q9UKG4 626 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 IFT52Q9Y366 437 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 DSPPQ9NZW4 1301 aa16.26■□□□□ 0.19
HSPG2-208ENST00000471322 LOC100130705A0A1B0GUX0 176 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 GADD45GO95257 159 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 LGI1O95970 557 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 GALNSP34059 522 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 CDH12P55289 794 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 MICAQ29983 383 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 CYP27C1Q4G0S4 372 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 KCTD21Q4G0X4 260 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 COLEC12Q5KU26 742 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 THAP5Q7Z6K1 395 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 GALNT12Q8IXK2 581 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 C8orf59Q8N0T1 100 aaPredicted RBP16.25■□□□□ 0.19
HSPG2-208ENST00000471322 GALNT6Q8NCL4 622 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 PHF10Q8WUB8 498 aaKnown RBP16.25■□□□□ 0.19
HSPG2-208ENST00000471322 NR4A3Q92570 626 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 RIT1Q92963 219 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 OTUB1Q96FW1 271 aaPredicted RBP16.25■□□□□ 0.19
HSPG2-208ENST00000471322 MUS81Q96NY9 551 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 DGAT2Q96PD7 388 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 OR1F2PQ96R84 312 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 PSD2Q9BQI7 771 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 ALOXE3Q9BYJ1 711 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 CXorf21Q9HAI6 301 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 ADAP2Q9NPF8 381 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 KRT84Q9NSB2 600 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 ACER3Q9NUN7 267 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 ZNF232Q9UNY5 417 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 MMACHCQ9Y4U1 282 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 CACNA1BQ00975 2339 aa16.25■□□□□ 0.19
HSPG2-208ENST00000471322 DPPA5A6NC42 116 aa16.24■□□□□ 0.19
HSPG2-208ENST00000471322 ARRDC5A6NEK1 342 aa16.24■□□□□ 0.19
HSPG2-208ENST00000471322 SCRG1O75711 98 aa16.24■□□□□ 0.19
HSPG2-208ENST00000471322 RECKO95980 971 aa16.24■□□□□ 0.19
HSPG2-208ENST00000471322 PABPC4LP0CB38 370 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms