RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 ALLCQ8N6M5 410 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 CCDC71LQ8N9Z2 235 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 DCAF4L2Q8NA75 395 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 ZBTB44Q8NCP5 570 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 ZNF540Q8NDQ6 660 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 LPCAT1Q8NF37 534 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 ZNF397Q8NF99 534 aaPredicted RBP0.84□□□□□ -2.27
UBXN4-207ENST00000471246 TMEM37Q8WXS4 190 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 HIST1H2ACQ93077 130 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 NEIL2Q969S2 332 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 TMEM80Q96HE8 168 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 SLC35E1Q96K37 410 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 DEFB118Q96PH6 123 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 TSPAN18Q96SJ8 248 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 FAM213AQ9BRX8 229 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 SCRT1Q9BWW7 348 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 CARD6Q9BX69 1037 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 MRPL9Q9BYD2 267 aaKnown RBP0.84□□□□□ -2.27
UBXN4-207ENST00000471246 ABCG4Q9H172 646 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 CYTL1Q9NRR1 136 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 PNO1Q9NRX1 252 aaKnown RBP0.84□□□□□ -2.27
UBXN4-207ENST00000471246 PIGVQ9NUD9 493 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 DCAF13Q9NV06 445 aaKnown RBP0.84□□□□□ -2.27
UBXN4-207ENST00000471246 MARCH5Q9NX47 278 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 EHFQ9NZC4 300 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 MBD2Q9UBB5 411 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 ONECUT1Q9UBC0 465 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 LCMT1Q9UIC8 334 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 TRMT6Q9UJA5 497 aaKnown RBP0.84□□□□□ -2.27
UBXN4-207ENST00000471246 DHRS7Q9Y394 339 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 L3MBTL1Q9Y468 752 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 SNX5Q9Y5X3 404 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 WSB1Q9Y6I7 421 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 PTPRUQ92729 1446 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 IGKV2D-24A0A075B6R9 120 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 SPRR5A0A1B0GTR4 108 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 A0A1B0GUA9 196 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 A0A1W2PQ67 120 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 CCDC69A6NI79 296 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 USP27XA6NNY8 438 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 ERVV-1B6SEH8 477 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF263O14978 683 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 SNAI2O43623 268 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 TRAF3IP2O43734 574 aaPredicted RBP0.83□□□□□ -2.28
UBXN4-207ENST00000471246 AKAP3O75969 853 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 TOXO94900 526 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 ANP32DO95626 131 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 PGK2P07205 417 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 APRTP07741 180 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 CD55P08174 381 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 HSP90AB1P08238 724 aaKnown RBP0.83□□□□□ -2.28
UBXN4-207ENST00000471246 GLULP15104 373 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 AREGP15514 252 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 VDAC1P21796 283 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 MARCKSP29966 332 aaPredicted RBP0.83□□□□□ -2.28
UBXN4-207ENST00000471246 TCF7P36402 384 aaPredicted RBP0.83□□□□□ -2.28
UBXN4-207ENST00000471246 TIMM10P62072 90 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 CCZ1BP86790 482 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 CCZ1P86791 482 aaPredicted RBP0.83□□□□□ -2.28
UBXN4-207ENST00000471246 TEFQ10587 303 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 GPNMBQ14956 572 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 SHHQ15465 462 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 CYP51A1Q16850 503 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 FAM133BQ5BKY9 247 aaKnown RBP0.83□□□□□ -2.28
UBXN4-207ENST00000471246 CMPK2Q5EBM0 449 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 DCST2Q5T1A1 773 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 HECTD3Q5T447 861 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF691Q5VV52 312 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 PRAMEF7Q5VXH5 474 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 C11orf88Q6PI97 169 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 TMED8Q6PL24 325 aaPredicted RBP0.83□□□□□ -2.28
UBXN4-207ENST00000471246 TMEM270Q6UE05 265 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 HACD2Q6Y1H2 254 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF589Q86UQ0 364 aaPredicted RBP0.83□□□□□ -2.28
UBXN4-207ENST00000471246 AMZ2Q86W34 360 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 GPBP1Q86WP2 473 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 SKA3Q8IX90 412 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF100Q8IYN0 542 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 H1FOOQ8IZA3 346 aaPredicted RBP0.83□□□□□ -2.28
UBXN4-207ENST00000471246 CENPSQ8N2Z9 138 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF561Q8N587 486 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 ARIH2OSQ8N7S6 290 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 TPRX1Q8N7U7 411 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 KIR2DL5BQ8NHK3 375 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 NEIL3Q8TAT5 605 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 GDAP1Q8TB36 358 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 C7orf33Q8WU49 177 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 ANKRD49Q8WVL7 239 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 ARNTL2Q8WYA1 636 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 TAF4BQ92750 862 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 RDH5Q92781 318 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 TMEM45BQ96B21 275 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 FGGYQ96C11 551 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 HAVCR1Q96D42 359 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 TMEM101Q96IK0 257 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 JAKMIP1Q96N16 626 aaKnown RBP0.83□□□□□ -2.28
UBXN4-207ENST00000471246 FUT8Q9BYC5 575 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 SLC5A7Q9GZV3 580 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 TRPV6Q9H1D0 765 aa0.83□□□□□ -2.28
UBXN4-207ENST00000471246 TMEM245Q9H330 911 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms