RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 KLRF1Q9NZS2 232 aa18.09■□□□□ 0.49
HDAC7-220ENST00000471235 FLRT3Q9NZU0 649 aa18.09■□□□□ 0.49
HDAC7-220ENST00000471235 FAF1Q9UNN5 650 aaPredicted RBP18.09■□□□□ 0.49
HDAC7-220ENST00000471235 TENM4Q6N022 2769 aa18.08■□□□□ 0.49
HDAC7-220ENST00000471235 SNX4O95219 450 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 KCNH1O95259 989 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 KRT16P08779 473 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 UQCRC2P22695 453 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 RFX3P48380 749 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 MAN2A2P49641 1150 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 RPS26P62854 115 aaKnown RBP18.08■□□□□ 0.48
HDAC7-220ENST00000471235 LRRC74AQ0VAA2 488 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 SQLEQ14534 574 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 FNDC7Q5VTL7 733 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 SLC30A6Q6NXT4 461 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 BHLHB9Q6PI77 547 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 BNC2Q6ZN30 1099 aaPredicted RBP18.08■□□□□ 0.48
HDAC7-220ENST00000471235 MSANTD1Q6ZTZ1 278 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 C6orf120Q7Z4R8 191 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 FAM109AQ8N4B1 249 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 OR52N2Q8NGI0 321 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 CHMP6Q96FZ7 201 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 TMEM41AQ96HV5 264 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 JSRP1Q96MG2 331 aaPredicted RBP18.08■□□□□ 0.48
HDAC7-220ENST00000471235 PANX1Q96RD7 426 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 PIGUQ9H490 435 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 ZNF385DQ9H6B1 395 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 ZDHHC11Q9H8X9 412 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 SERHLQ9NQF3 203 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 GIN1Q9NXP7 522 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 MRTO4Q9UKD2 239 aaKnown RBP18.08■□□□□ 0.48
HDAC7-220ENST00000471235 HRH3Q9Y5N1 445 aa18.08■□□□□ 0.48
HDAC7-220ENST00000471235 ASNA1O43681 348 aa18.07■□□□□ 0.48
HDAC7-220ENST00000471235 KCNK2O95069 426 aa18.07■□□□□ 0.48
HDAC7-220ENST00000471235 RFPL3SP0C7P2 107 aa18.07■□□□□ 0.48
HDAC7-220ENST00000471235 EVI2BP34910 448 aa18.07■□□□□ 0.48
HDAC7-220ENST00000471235 MAGEA5P43359 124 aa18.07■□□□□ 0.48
HDAC7-220ENST00000471235 PSMD4P55036 377 aaKnown RBP18.07■□□□□ 0.48
HDAC7-220ENST00000471235 IRX1P78414 480 aaPredicted RBP18.07■□□□□ 0.48
HDAC7-220ENST00000471235 HSF1Q00613 529 aa18.07■□□□□ 0.48
HDAC7-220ENST00000471235 SNTA1Q13424 505 aa18.07■□□□□ 0.48
HDAC7-220ENST00000471235 RCAN2Q14206 197 aa18.07■□□□□ 0.48
HDAC7-220ENST00000471235 KRTCAP3Q53RY4 240 aa18.07■□□□□ 0.48
HDAC7-220ENST00000471235 SAXO2Q658L1 398 aa18.07■□□□□ 0.48
HDAC7-220ENST00000471235 DNAJC14Q6Y2X3 702 aaPredicted RBP18.07■□□□□ 0.48
HDAC7-220ENST00000471235 GALNT10Q86SR1 603 aa18.07■□□□□ 0.48
HDAC7-220ENST00000471235 FUNDC1Q8IVP5 155 aa18.07■□□□□ 0.48
HDAC7-220ENST00000471235 OR5D16Q8NGK9 328 aa18.07■□□□□ 0.48
HDAC7-220ENST00000471235 FAM110BQ8TC76 370 aa18.07■□□□□ 0.48
HDAC7-220ENST00000471235 VPS33AQ96AX1 596 aa18.07■□□□□ 0.48
HDAC7-220ENST00000471235 ZNF317Q96PQ6 595 aaPredicted RBP18.07■□□□□ 0.48
HDAC7-220ENST00000471235 OR7D2Q96RA2 312 aa18.07■□□□□ 0.48
HDAC7-220ENST00000471235 SLC35A5Q9BS91 424 aa18.07■□□□□ 0.48
HDAC7-220ENST00000471235 BTBD2Q9BX70 525 aa18.07■□□□□ 0.48
HDAC7-220ENST00000471235 LIPGQ9Y5X9 500 aa18.07■□□□□ 0.48
HDAC7-220ENST00000471235 MYO18BQ8IUG5 2567 aa18.07■□□□□ 0.48
HDAC7-220ENST00000471235 ARHGAP21Q5T5U3 1957 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 CCDC154A6NI56 674 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 NR5A2O00482 541 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 ADAM10O14672 748 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 SNPHO15079 494 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 CDC40O60508 579 aaKnown RBP eCLIP18.06■□□□□ 0.48
HDAC7-220ENST00000471235 UTS2O95399 124 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 C1QCP02747 245 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 CELA3AP09093 270 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 MASP1P48740 699 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 POU6F2P78424 691 aaPredicted RBP18.06■□□□□ 0.48
HDAC7-220ENST00000471235 SF3A3Q12874 501 aaKnown RBP eCLIP18.06■□□□□ 0.48
HDAC7-220ENST00000471235 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.06■□□□□ 0.48
HDAC7-220ENST00000471235 EIF2S3LQ2VIR3 472 aaKnown RBP18.06■□□□□ 0.48
HDAC7-220ENST00000471235 CCNJQ5T5M9 372 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 FIGNL1Q6PIW4 674 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 ANGPTL8Q6UXH0 198 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 ZAR1Q86SH2 424 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 PACS2Q86VP3 889 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 GHDCQ8N2G8 530 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 ADAMTS15Q8TE58 950 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 NEURL3Q96EH8 262 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 DEFB127Q9H1M4 99 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 PLSCR2Q9NRY7 297 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 C15orf41Q9Y2V0 281 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 WIF1Q9Y5W5 379 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 KCNE3Q9Y6H6 103 aa18.06■□□□□ 0.48
HDAC7-220ENST00000471235 C2orf72A6NCS6 295 aa18.05■□□□□ 0.48
HDAC7-220ENST00000471235 RFXANKO14593 260 aa18.05■□□□□ 0.48
HDAC7-220ENST00000471235 GNB5O14775 395 aa18.05■□□□□ 0.48
HDAC7-220ENST00000471235 SCO2O43819 266 aa18.05■□□□□ 0.48
HDAC7-220ENST00000471235 FADS1O60427 444 aa18.05■□□□□ 0.48
HDAC7-220ENST00000471235 GSNP06396 782 aa18.05■□□□□ 0.48
HDAC7-220ENST00000471235 NCF2P19878 526 aaPredicted RBP18.05■□□□□ 0.48
HDAC7-220ENST00000471235 MATN1P21941 496 aa18.05■□□□□ 0.48
HDAC7-220ENST00000471235 CHI3L1P36222 383 aaPredicted RBP18.05■□□□□ 0.48
HDAC7-220ENST00000471235 GAS1P54826 345 aa18.05■□□□□ 0.48
HDAC7-220ENST00000471235 CASP9P55211 416 aa18.05■□□□□ 0.48
HDAC7-220ENST00000471235 KCNC4Q03721 635 aa18.05■□□□□ 0.48
HDAC7-220ENST00000471235 GRAMD1BQ3KR37 738 aa18.05■□□□□ 0.48
HDAC7-220ENST00000471235 BLOC1S3Q6QNY0 202 aa18.05■□□□□ 0.48
HDAC7-220ENST00000471235 FGD2Q7Z6J4 655 aa18.05■□□□□ 0.48
HDAC7-220ENST00000471235 CHERPQ8IWX8 916 aaKnown RBP18.05■□□□□ 0.48
HDAC7-220ENST00000471235 PRR7Q8TB68 274 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms