RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 C11orf84Q9BUA3 381 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-210ENST00000471181 MMP27Q9H306 513 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 NLKQ9UBE8 527 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 DLGAP4Q9Y2H0 992 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 H3BML4 177 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 KIAA0355O15063 1070 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 FANCGO15287 622 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 TMEM63AO94886 807 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF44P15621 663 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 XCR1P46094 333 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 SGSHP51688 502 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 CYCSP99999 105 aaKnown RBP6.56□□□□□ -1.36
BRCA1-210ENST00000471181 FGFBP1Q14512 234 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF169Q14929 603 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-210ENST00000471181 SIRPB2Q5JXA9 342 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 TMEM201Q5SNT2 666 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 LCLAT1Q6UWP7 414 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 MOB3CQ70IA8 216 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 SLC35F2Q8IXU6 374 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 DNAJC22Q8N4W6 341 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 OR4A16Q8NH70 328 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 CD99L2Q8TCZ2 262 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 INPP4AQ96PE3 977 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-210ENST00000471181 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-210ENST00000471181 RCCD1A6NED2 376 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 SYN3O14994 580 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 GPR37L1O60883 481 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 B3GALNT1O75752 331 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 CLIC3O95833 236 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 EOMESO95936 686 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 GALTP07902 379 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 CD63P08962 238 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 METTL15P1P0C7V9 234 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 KDELR2P33947 212 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 GCGRP47871 477 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 GABRA4P48169 554 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 GSK3BP49841 420 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 MZT1Q08AG7 82 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 GBX1Q14549 363 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 DUSP7Q16829 419 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 CES4AQ5XG92 561 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 RPL13AP3Q6NVV1 102 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 ASPGQ86U10 573 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 ADGRF3Q8IZF5 1079 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 SPARTQ8N0X7 666 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 C15orf54Q8N8G6 183 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 SMIM12Q96EX1 92 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 CACNG6Q9BXT2 260 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 SLC29A3Q9BZD2 475 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 FAM120CQ9NX05 1096 aaKnown RBP6.55□□□□□ -1.36
BRCA1-210ENST00000471181 CLCF1Q9UBD9 225 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 PCDHAC2Q9Y5I4 1007 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 SMIM35A0A1B0GVV1 85 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 OR2M5A3KFT3 312 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 ATP6V1G2-DDX39BF2Z307 99 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 SOCS6O14544 535 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 SERPINA2P20848 420 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 BCKDHBP21953 392 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 PRDX3P30048 256 aaKnown RBP6.55□□□□□ -1.36
BRCA1-210ENST00000471181 FLT3LGP49771 235 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 MLF1P58340 268 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 P2RY14Q15391 338 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 PRR22Q8IZ63 422 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 OR1J4Q8NGS1 313 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 OR8U1Q8NH10 309 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 OR52P1PQ8NH57 321 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 KCNA7Q96RP8 456 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 TINAGL1Q9GZM7 467 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-210ENST00000471181 H7BY64 318 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 J3QR89 54 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 WNT10BO00744 389 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 HSPB6O14558 160 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 XRCC3O43542 346 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 DUX1O43812 170 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 PIGRP01833 764 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 DHRS4L1P0CG22 281 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 HLA-EP13747 358 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 SYN1P17600 705 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 INHBEP58166 350 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 GABREP78334 506 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 CHRNEQ04844 493 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 SPOCK1Q08629 439 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF791Q3KP31 576 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-210ENST00000471181 RGMBQ6NW40 437 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF574Q6ZN55 896 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-210ENST00000471181 CILP2Q8IUL8 1156 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 C11orf42Q8N5U0 333 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 OR9A1PQ8NGU1 263 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 H1FXQ92522 213 aaKnown RBP6.55□□□□□ -1.36
BRCA1-210ENST00000471181 FAM46AQ96IP4 442 aaKnown RBP6.55□□□□□ -1.36
BRCA1-210ENST00000471181 PRAP1Q96NZ9 151 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 OR5B2Q96R09 309 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 ACBD6Q9BR61 282 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 WDR18Q9BV38 432 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 SLC19A3Q9BZV2 496 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 REEP4Q9H6H4 257 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 GPN2Q9H9Y4 310 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-210ENST00000471181 FOLH1BQ9HBA9 442 aa6.55□□□□□ -1.36
BRCA1-210ENST00000471181 NLE1Q9NVX2 485 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-210ENST00000471181 SMOXQ9NWM0 555 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms