RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 SDHAF3Q9NRP4 125 aa15.83■□□□□ 0.12
COL7A1-208ENST00000470076 PPP4R1LQ9P1A2 415 aa15.83■□□□□ 0.12
COL7A1-208ENST00000470076 ABCG2Q9UNQ0 655 aa15.83■□□□□ 0.12
COL7A1-208ENST00000470076 C19orf53Q9UNZ5 99 aaPredicted RBP15.83■□□□□ 0.12
COL7A1-208ENST00000470076 RPH3AQ9Y2J0 694 aaPredicted RBP15.83■□□□□ 0.12
COL7A1-208ENST00000470076 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 SH3D21A4FU49 640 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 A8MXE2 369 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 B4DXG7 233 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 UBFD1O14562 309 aaKnown RBP15.82■□□□□ 0.12
COL7A1-208ENST00000470076 TNFSF13O75888 250 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 HRGP04196 525 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 JUNP05412 331 aaKnown RBP15.82■□□□□ 0.12
COL7A1-208ENST00000470076 PEPDP12955 493 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 FOSL1P15407 271 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 MC3RP41968 323 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 FOXA1P55317 472 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 B3GALT5-AS1P59052 145 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 ADAM8P78325 824 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 SLC29A2Q14542 456 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 DECR1Q16698 335 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 DEFB113Q30KQ7 82 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 SH2D4BQ5SQS7 431 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 FAM71E1Q6IPT2 247 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 CHMP1BQ7LBR1 199 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 FADS6Q8N9I5 356 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.82■□□□□ 0.12
COL7A1-208ENST00000470076 MZB1Q8WU39 189 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 SMPDL3BQ92485 455 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 POM121Q96HA1 1249 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 NDRG3Q9UGV2 375 aa15.82■□□□□ 0.12
COL7A1-208ENST00000470076 A0A1W2PNV4 684 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 G3V2L1 256 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 LINC01387J3KSC0 135 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 KIF2AO00139 706 aaPredicted RBP15.81■□□□□ 0.12
COL7A1-208ENST00000470076 MSTNO14793 375 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 CASKO14936 926 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 SCO2O43819 266 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 FADS1O60427 444 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 GLRA3O75311 464 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 TGM6O95932 706 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 MYL2P10916 166 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 TCEA1P23193 301 aaKnown RBP15.81■□□□□ 0.12
COL7A1-208ENST00000470076 NTSP30990 170 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 PCYT1AP49585 367 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 EEFSECP57772 596 aaKnown RBP15.81■□□□□ 0.12
COL7A1-208ENST00000470076 GANABQ14697 944 aaKnown RBP15.81■□□□□ 0.12
COL7A1-208ENST00000470076 TMEM107Q6UX40 140 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 ZYG11AQ6WRX3 759 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 TRIM46Q7Z4K8 759 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 P4HA3Q7Z4N8 544 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 OR2L13Q8N349 312 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 MEIOBQ8N635 442 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 CEP112Q8N8E3 955 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 OR2M3Q8NG83 312 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 DSN1Q9H410 356 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 PTGES2Q9H7Z7 377 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 Q9N2J8 555 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 DDX18Q9NVP1 670 aaKnown RBP15.81■□□□□ 0.12
COL7A1-208ENST00000470076 FAM120CQ9NX05 1096 aaKnown RBP15.81■□□□□ 0.12
COL7A1-208ENST00000470076 TBK1Q9UHD2 729 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 MRTO4Q9UKD2 239 aaKnown RBP15.81■□□□□ 0.12
COL7A1-208ENST00000470076 EMCNQ9ULC0 261 aa15.81■□□□□ 0.12
COL7A1-208ENST00000470076 SLC22A20A6NK97 555 aa15.8■□□□□ 0.12
COL7A1-208ENST00000470076 UPK1AO00322 258 aa15.8■□□□□ 0.12
COL7A1-208ENST00000470076 CRCPO75575 148 aa15.8■□□□□ 0.12
COL7A1-208ENST00000470076 RSL1D1O76021 490 aaKnown RBP15.8■□□□□ 0.12
COL7A1-208ENST00000470076 PSMG1O95456 288 aa15.8■□□□□ 0.12
COL7A1-208ENST00000470076 IFI6P09912 130 aa15.8■□□□□ 0.12
COL7A1-208ENST00000470076 HK1P19367 917 aa15.8■□□□□ 0.12
COL7A1-208ENST00000470076 CLK3P49761 638 aaKnown RBP15.8■□□□□ 0.12
COL7A1-208ENST00000470076 PSMD4P55036 377 aaKnown RBP15.8■□□□□ 0.12
COL7A1-208ENST00000470076 ZNHIT3Q15649 155 aaPredicted RBP15.8■□□□□ 0.12
COL7A1-208ENST00000470076 PRSS53Q2L4Q9 553 aa15.8■□□□□ 0.12
COL7A1-208ENST00000470076 RAET1LQ5VY80 246 aa15.8■□□□□ 0.12
COL7A1-208ENST00000470076 IKBIPQ70UQ0 350 aa15.8■□□□□ 0.12
COL7A1-208ENST00000470076 UBQLNLQ8IYU4 475 aa15.8■□□□□ 0.12
COL7A1-208ENST00000470076 METTL2AQ96IZ6 378 aaKnown RBP15.8■□□□□ 0.12
COL7A1-208ENST00000470076 AMDHD1Q96NU7 426 aa15.8■□□□□ 0.12
COL7A1-208ENST00000470076 TXLNGYQ9BZA5 131 aa15.8■□□□□ 0.12
COL7A1-208ENST00000470076 GLIPR2Q9H4G4 154 aa15.8■□□□□ 0.12
COL7A1-208ENST00000470076 RRAGDQ9NQL2 400 aaPredicted RBP15.8■□□□□ 0.12
COL7A1-208ENST00000470076 DLL4Q9NR61 685 aa15.8■□□□□ 0.12
COL7A1-208ENST00000470076 POLR3HQ9Y535 204 aaPredicted RBP15.8■□□□□ 0.12
COL7A1-208ENST00000470076 PCNX3Q9H6A9 2034 aa15.8■□□□□ 0.12
COL7A1-208ENST00000470076 TTC36A6NLP5 189 aa15.79■□□□□ 0.12
COL7A1-208ENST00000470076 C17orf51A8MQB3 221 aa15.79■□□□□ 0.12
COL7A1-208ENST00000470076 IL33O95760 270 aa15.79■□□□□ 0.12
COL7A1-208ENST00000470076 FAM153BP0C7A2 387 aa15.79■□□□□ 0.12
COL7A1-208ENST00000470076 CPOXP36551 454 aa15.79■□□□□ 0.12
COL7A1-208ENST00000470076 POU4F3Q15319 338 aa15.79■□□□□ 0.12
COL7A1-208ENST00000470076 FAM153CQ494X1 144 aa15.79■□□□□ 0.12
COL7A1-208ENST00000470076 CFAP157Q5JU67 520 aa15.79■□□□□ 0.12
COL7A1-208ENST00000470076 NOXRED1Q6NXP6 359 aa15.79■□□□□ 0.12
COL7A1-208ENST00000470076 FRMD7Q6ZUT3 714 aa15.79■□□□□ 0.12
COL7A1-208ENST00000470076 KIF18AQ8NI77 898 aa15.79■□□□□ 0.12
COL7A1-208ENST00000470076 STARD4Q96DR4 205 aa15.79■□□□□ 0.12
COL7A1-208ENST00000470076 ELP4Q96EB1 424 aa15.79■□□□□ 0.12
COL7A1-208ENST00000470076 LMF2Q9BU23 707 aaKnown RBP15.79■□□□□ 0.12
COL7A1-208ENST00000470076 C3orf14Q9HBI5 128 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms