RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 UFD1Q92890 307 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 UBL7Q96S82 380 aaPredicted RBP9.01□□□□□ -0.97
HDAC3-205ENST00000469550 FSCN3Q9NQT6 498 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 TAS2R7Q9NYW3 318 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 MAT2BQ9NZL9 334 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 ACAD8Q9UKU7 415 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 RNF215Q9Y6U7 377 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 U3KQ87 197 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 FAM208BQ5VWN6 2430 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 SNTNA6NMZ2 147 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 H3BN98 237 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 FOXE1O00358 373 aaPredicted RBP9.01□□□□□ -0.97
HDAC3-205ENST00000469550 OR10H3O60404 316 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 TP53P04637 393 aaPredicted RBP9.01□□□□□ -0.97
HDAC3-205ENST00000469550 H1F0P07305 194 aaKnown RBP9.01□□□□□ -0.97
HDAC3-205ENST00000469550 ATP1B2P14415 290 aaPredicted RBP9.01□□□□□ -0.97
HDAC3-205ENST00000469550 GALP22466 123 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 LHCGRP22888 699 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 SLC6A1P30531 599 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 CHI3L1P36222 383 aaPredicted RBP9.01□□□□□ -0.97
HDAC3-205ENST00000469550 FEN1P39748 380 aaKnown RBP9.01□□□□□ -0.97
HDAC3-205ENST00000469550 DSTNP60981 165 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 RPS25P62851 125 aaKnown RBP9.01□□□□□ -0.97
HDAC3-205ENST00000469550 COL28A1Q2UY09 1125 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 CYP27C1Q4G0S4 372 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 ATP13A5Q4VNC0 1218 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 SYT14P1Q58G82 188 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 TCTN3Q6NUS6 607 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 PRICKLE2Q7Z3G6 844 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 LRRC56Q8IYG6 542 aaPredicted RBP9.01□□□□□ -0.97
HDAC3-205ENST00000469550 DEFB119Q8N690 84 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 OR4M2Q8NGB6 313 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 OR4K1Q8NGD4 311 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 OR8H1Q8NGG4 311 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 ZCCHC14Q8WYQ9 949 aaKnown RBP9.01□□□□□ -0.97
HDAC3-205ENST00000469550 TMEM203Q969S6 136 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 PPCDCQ96CD2 204 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 SCRN2Q96FV2 425 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 PKP4Q99569 1192 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 ATF6BQ99941 703 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 SPNS1Q9H2V7 528 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 EMC7Q9NPA0 242 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 A4GALTQ9NPC4 353 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 MYNNQ9NPC7 610 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 CD93Q9NPY3 652 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 B3GAT2Q9NPZ5 323 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 RHCGQ9UBD6 479 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 COMMD3Q9UBI1 195 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 KLK13Q9UKR3 277 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 EXOSC1Q9Y3B2 195 aaKnown RBP9.01□□□□□ -0.97
HDAC3-205ENST00000469550 MAP4K5Q9Y4K4 846 aa9.01□□□□□ -0.97
HDAC3-205ENST00000469550 GON4LQ3T8J9 2241 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 C7orf66A4D0T2 115 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 NPIPB15A6NHN6 443 aaPredicted RBP9□□□□□ -0.97
HDAC3-205ENST00000469550 K7ERQ8 282 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 CASKO14936 926 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 TLX2O43763 284 aaPredicted RBP9□□□□□ -0.97
HDAC3-205ENST00000469550 HPGDSO60760 199 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 PSIP1O75475 530 aaKnown RBP9□□□□□ -0.97
HDAC3-205ENST00000469550 SLCO2B1O94956 709 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 SOD1P00441 154 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 TPOP07202 933 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 ACP2P11117 423 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 UQCRC2P22695 453 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 SERPINA4P29622 427 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 EVI2BP34910 448 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 INPP1P49441 399 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 ATP12AP54707 1039 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 FABP5Q01469 135 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 RGS1Q08116 209 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 IL18Q14116 193 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 P2RY14Q15391 338 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 MPEG1Q2M385 716 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 FAM71E1Q6IPT2 247 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 AGTRAPQ6RW13 159 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 KIAA1324Q6UXG2 1013 aaKnown RBP9□□□□□ -0.97
HDAC3-205ENST00000469550 WDR53Q7Z5U6 358 aaPredicted RBP9□□□□□ -0.97
HDAC3-205ENST00000469550 TSPAN33Q86UF1 283 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 GLCCI1Q86VQ1 547 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 ZNF680Q8NEM1 530 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 OR56A3Q8NH54 315 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 LRRC20Q8TCA0 184 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 ASZ1Q8WWH4 475 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 ADAMTS14Q8WXS8 1223 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 ACOT12Q8WYK0 555 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 TOE1Q96GM8 510 aaKnown RBP9□□□□□ -0.97
HDAC3-205ENST00000469550 ZNF582Q96NG8 517 aaPredicted RBP9□□□□□ -0.97
HDAC3-205ENST00000469550 ARHGAP9Q9BRR9 750 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 C2orf49Q9BVC5 232 aaPredicted RBP9□□□□□ -0.97
HDAC3-205ENST00000469550 PRR14Q9BWN1 585 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 TM6SF2Q9BZW4 377 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 SLC6A17Q9H1V8 727 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 GALNT9Q9HCQ5 603 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 TVP23BQ9NYZ1 205 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 ICKQ9UPZ9 632 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 POLHQ9Y253 713 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 KCNE2Q9Y6J6 123 aa9□□□□□ -0.97
HDAC3-205ENST00000469550 A0A1W2PRB8 838 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 METTL12A8MUP2 240 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 WASH3PC4AMC7 463 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms