RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 UBE2Q1Q7Z7E8 422 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 ANKK1Q8NFD2 765 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 OR52R1Q8NGF1 315 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 OR52E2Q8NGJ4 325 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 SAMD8Q96LT4 415 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 BCL7BQ9BQE9 202 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 CRB3Q9BUF7 120 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 VN1R3Q9BXE9 311 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 MROQ9BYG7 248 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 EVA1AQ9H8M9 152 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 SP140LQ9H930 580 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 ASB1Q9Y576 335 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 TSPAN12O95859 305 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 PRKCAP17252 672 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 EIF1AXP47813 144 aaKnown RBP12.97□□□□□ -0.33
BRAT1-203ENST00000467558 EMP2P54851 167 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 PYCR3Q53H96 274 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 ASTLQ6HA08 431 aaPredicted RBP12.97□□□□□ -0.33
BRAT1-203ENST00000467558 FAM71E1Q6IPT2 247 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 PLBD1Q6P4A8 553 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 ABHD17CQ6PCB6 329 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 FAM180AQ6UWF9 173 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 CHERPQ8IWX8 916 aaKnown RBP12.97□□□□□ -0.33
BRAT1-203ENST00000467558 JAGN1Q8N5M9 183 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 IL22RA1Q8N6P7 574 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 OR13H1Q8NG92 308 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 OR2T4Q8NH00 348 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 SLC38A5Q8WUX1 472 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 TM4SF18Q96CE8 201 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 TTTY10Q9BZA0 68 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 IFT46Q9NQC8 304 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 EBF1Q9UH73 591 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 GPR52Q9Y2T5 361 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 CMAHPQ9Y471 501 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 CEP290O15078 2479 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 FMO6PO60774 539 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 PNMTP11086 282 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 PEPDP12955 493 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 ANKDD1AQ495B1 522 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 ZNF595Q8IYB9 648 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 TOMM5Q8N4H5 51 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 PDXPQ96GD0 296 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 PHF7Q9BWX1 381 aaPredicted RBP12.97□□□□□ -0.33
BRAT1-203ENST00000467558 BCL2L14Q9BZR8 327 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 LHPPQ9H008 270 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 SIPA1L1O43166 1804 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 SH3PXD2BA1X283 911 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 KIAA0513O60268 411 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 SPARCP09486 303 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 S1PR1P21453 382 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 SLC6A8P48029 635 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 CSNK1EP49674 416 aaKnown RBP12.97□□□□□ -0.33
BRAT1-203ENST00000467558 NFATC3Q12968 1075 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 EXOSC7Q15024 291 aaKnown RBP12.97□□□□□ -0.33
BRAT1-203ENST00000467558 SDR16C5Q8N3Y7 309 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 KIAA1958Q8N8K9 716 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 C19orf47Q8N9M1 422 aaKnown RBP12.97□□□□□ -0.33
BRAT1-203ENST00000467558 GATAD2BQ8WXI9 593 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 PPP1R14BQ96C90 147 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 NEURL3Q96EH8 262 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 BTBD2Q9BX70 525 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 DPH1Q9BZG8 443 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 B3GNT4Q9C0J1 378 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 ZNF304Q9HCX3 659 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 IL20RAQ9UHF4 553 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 KLHL21Q9UJP4 597 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 SLC35A3Q9Y2D2 325 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 SHROOM3Q8TF72 1996 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 C7orf72A4D263 438 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 METTL21EPA6NDL7 271 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 FAM25EA8MYX2 175 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 WBP4O75554 376 aaKnown RBP12.97□□□□□ -0.33
BRAT1-203ENST00000467558 MAZP56270 477 aaKnown RBP12.97□□□□□ -0.33
BRAT1-203ENST00000467558 MFSD13AQ14CX5 517 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 FAM69BQ5VUD6 431 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 ASB18Q6ZVZ8 466 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 SPRED1Q7Z699 444 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 KLBQ86Z14 1044 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 MS4A15Q8N5U1 240 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 OR4K13Q8NH42 304 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 ADAMTS16Q8TE57 1224 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 DIO2Q92813 273 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 CXorf36Q9H7Y0 433 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 RNF121Q9H920 327 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 KCMF1Q9P0J7 381 aa12.97□□□□□ -0.33
BRAT1-203ENST00000467558 NFKBIL1Q9UBC1 381 aaPredicted RBP12.97□□□□□ -0.33
BRAT1-203ENST00000467558 SMIM30A4D0T7 59 aa12.96□□□□□ -0.33
BRAT1-203ENST00000467558 FAM172BPA6NC97 362 aa12.96□□□□□ -0.33
BRAT1-203ENST00000467558 CDC40O60508 579 aaKnown RBP eCLIP12.96□□□□□ -0.33
BRAT1-203ENST00000467558 CTSLP07711 333 aa12.96□□□□□ -0.33
BRAT1-203ENST00000467558 OR2B6P58173 313 aa12.96□□□□□ -0.33
BRAT1-203ENST00000467558 ZC3H14Q6PJT7 736 aaKnown RBP12.96□□□□□ -0.33
BRAT1-203ENST00000467558 CNN2Q99439 309 aaKnown RBP12.96□□□□□ -0.33
BRAT1-203ENST00000467558 A0A1B0GVI7 797 aa12.96□□□□□ -0.33
BRAT1-203ENST00000467558 RAB38P57729 211 aa12.96□□□□□ -0.33
BRAT1-203ENST00000467558 PRPS1P60891 318 aa12.96□□□□□ -0.33
BRAT1-203ENST00000467558 RACK1P63244 317 aaKnown RBP12.96□□□□□ -0.33
BRAT1-203ENST00000467558 LSAMPQ13449 338 aa12.96□□□□□ -0.33
BRAT1-203ENST00000467558 ODF4Q2M2E3 257 aa12.96□□□□□ -0.33
BRAT1-203ENST00000467558 SLC25A24Q6NUK1 477 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms