RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 CCSAPQ6IQ19 270 aaPredicted RBP18.52■□□□□ 0.56
SDF4-205ENST00000465727 CDC73Q6P1J9 531 aa18.52■□□□□ 0.56
SDF4-205ENST00000465727 SFXN4Q6P4A7 337 aa18.52■□□□□ 0.56
SDF4-205ENST00000465727 LYPD4Q6UWN0 246 aa18.52■□□□□ 0.56
SDF4-205ENST00000465727 GDPD4Q6W3E5 623 aa18.52■□□□□ 0.56
SDF4-205ENST00000465727 TMEM150AQ86TG1 271 aa18.52■□□□□ 0.56
SDF4-205ENST00000465727 CMIPQ8IY22 773 aa18.52■□□□□ 0.56
SDF4-205ENST00000465727 PIAS4Q8N2W9 510 aaPredicted RBP18.52■□□□□ 0.56
SDF4-205ENST00000465727 ZNF461Q8TAF7 563 aa18.52■□□□□ 0.56
SDF4-205ENST00000465727 SETD7Q8WTS6 366 aaKnown RBP18.52■□□□□ 0.56
SDF4-205ENST00000465727 RIOK2Q9BVS4 552 aaKnown RBP18.52■□□□□ 0.56
SDF4-205ENST00000465727 SORBS1Q9BX66 1292 aaKnown RBP18.52■□□□□ 0.56
SDF4-205ENST00000465727 CACNG6Q9BXT2 260 aa18.52■□□□□ 0.56
SDF4-205ENST00000465727 OR51I1Q9H343 314 aa18.52■□□□□ 0.56
SDF4-205ENST00000465727 ANKRD19PQ9H560 264 aa18.52■□□□□ 0.56
SDF4-205ENST00000465727 MTCL1Q9Y4B5 1905 aaKnown RBP18.52■□□□□ 0.55
SDF4-205ENST00000465727 A0A1W2PPL8 197 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 PRAMEF27A3QJZ7 478 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 M0R233 179 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 PLPP1O14494 284 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 ATP6V1E1P36543 226 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 EPHA5P54756 1037 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 PITPNAQ00169 270 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 FZD5Q13467 585 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 TPGS2Q68CL5 300 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 KIAA1161Q6NSJ0 714 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 C17orf99Q6UX52 265 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 BTN2A1Q7KYR7 527 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 ARL14EPQ8N8R7 260 aaPredicted RBP18.51■□□□□ 0.55
SDF4-205ENST00000465727 CEP76Q8TAP6 659 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 GLYATL1Q969I3 302 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 ABHD1Q96SE0 405 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 MRPL9Q9BYD2 267 aaKnown RBP18.51■□□□□ 0.55
SDF4-205ENST00000465727 TMEM168Q9H0V1 697 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 COQ3Q9NZJ6 369 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 HCSTQ9UBK5 93 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 RASD1Q9Y272 281 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 LOC105369274A0A096LPK9 316 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 ABLIM3O94929 683 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 H2AFB2P0C5Z0 115 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 GIFP27352 417 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 HOXD10P28358 340 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 GATMP50440 423 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 ANXA11P50995 505 aaKnown RBP18.51■□□□□ 0.55
SDF4-205ENST00000465727 MMP15P51511 669 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 TRAM2Q15035 370 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 SLC22A10Q63ZE4 541 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 B3GLCTQ6Y288 498 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 ASPGQ86U10 573 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 OR4N4Q8N0Y3 316 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 UXS1Q8NBZ7 420 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 OR56B4Q8NH76 319 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 SUN3Q8TAQ9 357 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 BCL7CQ8WUZ0 217 aaPredicted RBP18.51■□□□□ 0.55
SDF4-205ENST00000465727 XAGE5Q8WWM1 108 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 PINK1Q9BXM7 581 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 EPHX3Q9H6B9 360 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 BABAM2Q9NXR7 383 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 RDH8Q9NYR8 311 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 SLC25A13Q9UJS0 675 aa18.51■□□□□ 0.55
SDF4-205ENST00000465727 PI15O43692 258 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 FZD7O75084 574 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 UBL3O95164 117 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 EPPINO95925 133 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 CST5P28325 142 aaPredicted RBP18.5■□□□□ 0.55
SDF4-205ENST00000465727 STAT5AP42229 794 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 SRP9P49458 86 aaKnown RBP18.5■□□□□ 0.55
SDF4-205ENST00000465727 TMEM115Q12893 351 aaPredicted RBP18.5■□□□□ 0.55
SDF4-205ENST00000465727 KHDRBS2Q5VWX1 349 aaKnown RBP18.5■□□□□ 0.55
SDF4-205ENST00000465727 RRM2BQ7LG56 351 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 TECPR1Q7Z6L1 1165 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 MS4A15Q8N5U1 240 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 ZNF740Q8NDX6 193 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 RPLP0P6Q8NHW5 317 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 GIMAP1Q8WWP7 306 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 IL20Q9NYY1 176 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 H2AFY2Q9P0M6 372 aaPredicted RBP18.5■□□□□ 0.55
SDF4-205ENST00000465727 PRKAG2Q9UGJ0 569 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 J3QRE1 110 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 FPR3P25089 353 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 SSTR2P30874 369 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 LCN1P31025 176 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 TRIM23P36406 574 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 KHKP50053 298 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 TAS2R41P59536 307 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 ST3GAL2Q16842 350 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 ZNF658BQ4V348 819 aaPredicted RBP18.5■□□□□ 0.55
SDF4-205ENST00000465727 CLEC12AQ5QGZ9 265 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 PCSK9Q8NBP7 692 aaKnown RBP18.5■□□□□ 0.55
SDF4-205ENST00000465727 OR2T4Q8NH00 348 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 PIGXQ8TBF5 258 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 YIPF5Q969M3 257 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 ZNF689Q96CS4 500 aaPredicted RBP18.5■□□□□ 0.55
SDF4-205ENST00000465727 AHCYL2Q96HN2 611 aaKnown RBP18.5■□□□□ 0.55
SDF4-205ENST00000465727 TRIM36Q9NQ86 728 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 MED9Q9NWA0 146 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 TMEM5Q9Y2B1 443 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 CSNK1G3Q9Y6M4 447 aa18.5■□□□□ 0.55
SDF4-205ENST00000465727 hCG_1807616A0A1W2PRN6 198 aa18.49■□□□□ 0.55
SDF4-205ENST00000465727 SYT5O00445 386 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms