RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 RNF138Q8WVD3 245 aa15.55■□□□□ 0.08
USP39-211ENST00000465282 PIK3R3Q92569 461 aa15.55■□□□□ 0.08
USP39-211ENST00000465282 NTNG2Q96CW9 530 aa15.55■□□□□ 0.08
USP39-211ENST00000465282 RMND5BQ96G75 393 aaPredicted RBP15.55■□□□□ 0.08
USP39-211ENST00000465282 DOHHQ9BU89 302 aa15.55■□□□□ 0.08
USP39-211ENST00000465282 FAM107BQ9H098 131 aa15.55■□□□□ 0.08
USP39-211ENST00000465282 RAD21L1Q9H4I0 556 aa15.55■□□□□ 0.08
USP39-211ENST00000465282 METTL7AQ9H8H3 244 aa15.55■□□□□ 0.08
USP39-211ENST00000465282 DEPPQ9NTK1 212 aa15.55■□□□□ 0.08
USP39-211ENST00000465282 BOKQ9UMX3 212 aaPredicted RBP15.55■□□□□ 0.08
USP39-211ENST00000465282 GMEB1Q9Y692 573 aa15.55■□□□□ 0.08
USP39-211ENST00000465282 SHANK1Q9Y566 2161 aa15.55■□□□□ 0.08
USP39-211ENST00000465282 GXYLT2A0PJZ3 443 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 GSNP06396 782 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 NGFRP08138 427 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 GUSBP08236 651 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 PPIBP23284 216 aaKnown RBP15.54■□□□□ 0.08
USP39-211ENST00000465282 CLK3P49761 638 aaKnown RBP15.54■□□□□ 0.08
USP39-211ENST00000465282 KCNJ2P63252 427 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 TLE1Q04724 770 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 SF3A3Q12874 501 aaKnown RBP eCLIP15.54■□□□□ 0.08
USP39-211ENST00000465282 KLF10Q13118 480 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 COQ5Q5HYK3 327 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 COLEC12Q5KU26 742 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 SLC2A7Q6PXP3 512 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 PIGWQ7Z7B1 504 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 SLC22A16Q86VW1 577 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 CHDHQ8NE62 594 aaPredicted RBP15.54■□□□□ 0.08
USP39-211ENST00000465282 NR4A3Q92570 626 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 CDS1Q92903 461 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 EFHD2Q96C19 240 aaPredicted RBP15.54■□□□□ 0.08
USP39-211ENST00000465282 DTNBP1Q96EV8 351 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 PAIP1Q9H074 479 aaKnown RBP15.54■□□□□ 0.08
USP39-211ENST00000465282 TPT1P8Q9HAU6 139 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 IL1RL2Q9HB29 575 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 PROK2Q9HC23 129 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 OLAHQ9NV23 265 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 ASF1BQ9NVP2 202 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 THUMPD1Q9NXG2 353 aaKnown RBP15.54■□□□□ 0.08
USP39-211ENST00000465282 ADAM21Q9UKJ8 722 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 NTNG1Q9Y2I2 539 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 PCDHB14Q9Y5E9 798 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 CAPN7Q9Y6W3 813 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.54■□□□□ 0.08
USP39-211ENST00000465282 ZNF462Q96JM2 2506 aa15.54■□□□□ 0.08
USP39-211ENST00000465282 SPENQ96T58 3664 aaKnown RBP15.54■□□□□ 0.08
USP39-211ENST00000465282 PRAMEF25A6NGN4 478 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 BBIP1A8MTZ0 92 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 ACOT7O00154 380 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 SHOX2O60902 331 aaPredicted RBP15.53■□□□□ 0.08
USP39-211ENST00000465282 TRIM3O75382 744 aaPredicted RBP15.53■□□□□ 0.08
USP39-211ENST00000465282 NPPAP01160 153 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 CYP4B1P13584 511 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 ZNF24P17028 368 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 ATP6V1C1P21283 382 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 ELAVL4P26378 380 aaKnown RBP15.53■□□□□ 0.08
USP39-211ENST00000465282 GPR85P60893 370 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 ALDH6A1Q02252 535 aaKnown RBP15.53■□□□□ 0.08
USP39-211ENST00000465282 FOXO1Q12778 655 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 ARHGAP11BQ3KRB8 267 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 KRTCAP3Q53RY4 240 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 DCST2Q5T1A1 773 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 AP1ARQ63HQ0 302 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 HEPHL1Q6MZM0 1159 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 ANGPTL8Q6UXH0 198 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 CLEC4FQ8N1N0 589 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 FBXO30Q8TB52 745 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 OIT3Q8WWZ8 545 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 TMEM41AQ96HV5 264 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 ZNF597Q96LX8 424 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 NODALQ96S42 347 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 OSBPL11Q9BXB4 747 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 NMUR2Q9GZQ4 415 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 HOXD1Q9GZZ0 328 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 OR51I1Q9H343 314 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 ZFP64Q9NPA5 681 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 POLE3Q9NRF9 147 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 SDHAF3Q9NRP4 125 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 UBQLN4Q9NRR5 601 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 KLRF1Q9NZS2 232 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 LIPT1Q9Y234 373 aa15.53■□□□□ 0.08
USP39-211ENST00000465282 RP1L1Q8IWN7 2480 aaPredicted RBP15.52■□□□□ 0.08
USP39-211ENST00000465282 FADS1O60427 444 aa15.52■□□□□ 0.08
USP39-211ENST00000465282 ICOSLGO75144 302 aa15.52■□□□□ 0.08
USP39-211ENST00000465282 GLSO94925 669 aaPredicted RBP15.52■□□□□ 0.08
USP39-211ENST00000465282 EDN3P14138 238 aa15.52■□□□□ 0.08
USP39-211ENST00000465282 HOXB9P17482 250 aaPredicted RBP15.52■□□□□ 0.08
USP39-211ENST00000465282 TBXA2RP21731 343 aa15.52■□□□□ 0.08
USP39-211ENST00000465282 EVI2BP34910 448 aa15.52■□□□□ 0.08
USP39-211ENST00000465282 DNASE1L1P49184 302 aa15.52■□□□□ 0.08
USP39-211ENST00000465282 RPS26P62854 115 aaKnown RBP15.52■□□□□ 0.08
USP39-211ENST00000465282 PLGLB1Q02325 96 aa15.52■□□□□ 0.08
USP39-211ENST00000465282 FADDQ13158 208 aa15.52■□□□□ 0.08
USP39-211ENST00000465282 STX5Q13190 355 aa15.52■□□□□ 0.08
USP39-211ENST00000465282 UBAP2LQ14157 1087 aaKnown RBP15.52■□□□□ 0.08
USP39-211ENST00000465282 PAGE3Q5JUK9 113 aa15.52■□□□□ 0.08
USP39-211ENST00000465282 PRAMEF20Q5VT98 475 aa15.52■□□□□ 0.08
USP39-211ENST00000465282 DNAJC14Q6Y2X3 702 aaPredicted RBP15.52■□□□□ 0.08
USP39-211ENST00000465282 C16orf62Q7Z3J2 963 aa15.52■□□□□ 0.08
USP39-211ENST00000465282 RNF130Q86XS8 419 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms