RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 TSPAN2O60636 221 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 KCNK2O95069 426 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 NKX2-2O95096 273 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 RASAL1O95294 804 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 P04436 131 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 ALOX5P09917 674 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 CYP4B1P13584 511 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 TCEA1P23193 301 aaKnown RBP10.9□□□□□ -0.66
APTX-213ENST00000465003 MAN2A2P49641 1150 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 DCAF7P61962 342 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 KCNJ2P63252 427 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 FUT5Q11128 374 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 METTL21CQ5VZV1 264 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 SLC22A10Q63ZE4 541 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 CDC73Q6P1J9 531 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 TREML1Q86YW5 311 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 GOT1L1Q8NHS2 421 aaPredicted RBP10.9□□□□□ -0.66
APTX-213ENST00000465003 CPT1CQ8TCG5 803 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 SFXN5Q8TD22 340 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 ADAMTS15Q8TE58 950 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 PAQR8Q8TEZ7 354 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 XAGE5Q8WWM1 108 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 STON2Q8WXE9 905 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 HGDQ93099 445 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 ITCHQ96J02 903 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 FRMD6Q96NE9 622 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 COL21A1Q96P44 957 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 CCT8L2Q96SF2 557 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 DOHHQ9BU89 302 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 RMND5AQ9H871 391 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 METTL7AQ9H8H3 244 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 SH2D2AQ9NP31 389 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 TIMMDC1Q9NPL8 285 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 TUBA8Q9NY65 449 aaPredicted RBP10.9□□□□□ -0.66
APTX-213ENST00000465003 KLRF1Q9NZS2 232 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 ANAPC2Q9UJX6 822 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 CNOT11Q9UKZ1 510 aaKnown RBP10.9□□□□□ -0.66
APTX-213ENST00000465003 CENPVL1A0A0U1RR11 272 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 PRAMEF27A3QJZ7 478 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 ANGPT2O15123 496 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 TO15178 435 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 HS6ST1O60243 411 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 UNC5CO95185 931 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 ZIC2O95409 532 aaPredicted RBP10.89□□□□□ -0.67
APTX-213ENST00000465003 NUDT7P0C024 238 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 RFPL3SP0C7P2 107 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 ETFAP13804 333 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 KRT20P35900 424 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 CASP3P42574 277 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 PRIM2P49643 509 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 TMED10P49755 219 aaKnown RBP10.89□□□□□ -0.67
APTX-213ENST00000465003 HSF1Q00613 529 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 SLC15A4Q8N697 577 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 TMEM178AQ8NBL3 297 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 OR2M7Q8NG81 312 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 ZFP90Q8TF47 636 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 NEURL3Q96EH8 262 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 QRSL1Q9H0R6 528 aaKnown RBP10.89□□□□□ -0.67
APTX-213ENST00000465003 TPT1P8Q9HAU6 139 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 SACM1LQ9NTJ5 587 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 FREM3P0C091 2139 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 MED12Q93074 2177 aa10.89□□□□□ -0.67
APTX-213ENST00000465003 A0A1W2PP18 115 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 HMGN4O00479 90 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 GNB5O14775 395 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 FCMRO60667 390 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 PDE9AO76083 593 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 KCNH1O95259 989 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 SNRPB2P08579 225 aaKnown RBP10.88□□□□□ -0.67
APTX-213ENST00000465003 CELA3AP09093 270 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 HOXB9P17482 250 aaPredicted RBP10.88□□□□□ -0.67
APTX-213ENST00000465003 MST1P26927 711 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 PTGDSP41222 190 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 CRATP43155 626 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 MVDP53602 400 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 SELPLGQ14242 412 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 DECR1Q16698 335 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 EXOSC6Q5RKV6 272 aaKnown RBP10.88□□□□□ -0.67
APTX-213ENST00000465003 DCST2Q5T1A1 773 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 APOOLQ6UXV4 268 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 HPS6Q86YV9 775 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 GOLM1Q8NBJ4 401 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 OR4C3Q8NH37 302 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 SPPL2AQ8TCT8 520 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 HOXB13Q92826 284 aaPredicted RBP10.88□□□□□ -0.67
APTX-213ENST00000465003 MAL2Q969L2 176 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 TNFRSF10DQ9UBN6 386 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 NDUFAF1Q9Y375 327 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 CAPN7Q9Y6W3 813 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 PCNX3Q9H6A9 2034 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 SHOX2O60902 331 aaPredicted RBP10.88□□□□□ -0.67
APTX-213ENST00000465003 CPA2P48052 419 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 MTPNP58546 118 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 POU6F2P78424 691 aaPredicted RBP10.88□□□□□ -0.67
APTX-213ENST00000465003 SYPL1Q16563 259 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 GRAMD1BQ3KR37 738 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 CYP27C1Q4G0S4 372 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 REP15Q6BDI9 236 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 FAM180AQ6UWF9 173 aa10.88□□□□□ -0.67
APTX-213ENST00000465003 PIGWQ7Z7B1 504 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms