RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ELAVL4P26378 380 aaKnown RBP9.26□□□□□ -0.93
PTPRD-207ENST00000463477 EIF2S3P41091 472 aaKnown RBP9.26□□□□□ -0.93
PTPRD-207ENST00000463477 SLC15A1P46059 708 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 CAPZBP47756 277 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 PPM1FP49593 454 aaPredicted RBP9.26□□□□□ -0.93
PTPRD-207ENST00000463477 HYAL2Q12891 473 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 TMED1Q13445 227 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 KRT33BQ14525 404 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 SLC9A5Q14940 896 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 PTGES3Q15185 160 aaKnown RBP9.26□□□□□ -0.93
PTPRD-207ENST00000463477 NDUFA9Q16795 377 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 ANKDD1AQ495B1 522 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 SPDYE7PQ495Y7 208 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 NDUFAF5Q5TEU4 345 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 ZNF425Q6IV72 752 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 TCTN3Q6NUS6 607 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 TNFAIP8L2Q6P589 184 aaPredicted RBP9.26□□□□□ -0.93
PTPRD-207ENST00000463477 ABHD17CQ6PCB6 329 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 ZNF793Q6ZN11 406 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 Q6ZPB1 254 aaPredicted RBP9.26□□□□□ -0.93
PTPRD-207ENST00000463477 DCDC5Q6ZRR9 648 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 ZNF367Q7RTV3 350 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 SLC46A3Q7Z3Q1 461 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 KRT73Q86Y46 540 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 TAGAPQ8N103 731 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 MFSD9Q8NBP5 474 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 MINDY2Q8NBR6 621 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 OR2L5Q8NG80 312 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 OR2L3Q8NG85 312 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 OR52E1Q8NGJ3 308 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 OR6Q1Q8NGQ2 317 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 EXOSC8Q96B26 276 aaKnown RBP9.26□□□□□ -0.93
PTPRD-207ENST00000463477 MS4A6EQ96DS6 147 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 ZDHHC12Q96GR4 267 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 SERHL2Q9H4I8 314 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 PRDM7Q9NQW5 492 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 GIN1Q9NXP7 522 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 SEMA5BQ9P283 1151 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 REV1Q9UBZ9 1251 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 RAXQ9Y2V3 346 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 ASB4Q9Y574 426 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 KLK4Q9Y5K2 254 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 CORINQ9Y5Q5 1042 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 PKD1L2Q7Z442 2459 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 A0A1W2PRQ8 180 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 B4E171 279 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 ASNA1O43681 348 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 NADKO95544 446 aaPredicted RBP9.26□□□□□ -0.93
PTPRD-207ENST00000463477 GASTP01350 101 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 HIST1H1TP22492 207 aaPredicted RBP9.26□□□□□ -0.93
PTPRD-207ENST00000463477 CHMP24386 653 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 CMPK1P30085 196 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 BCL6P41182 706 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 TSPAN7P41732 249 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 IDH2P48735 452 aaKnown RBP9.26□□□□□ -0.93
PTPRD-207ENST00000463477 CRISP3P54108 245 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 COX10Q12887 443 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 HSPB3Q12988 150 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 DGCR6Q14129 220 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 TIGD6Q17RP2 521 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 RGS21Q2M5E4 152 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 DCST1Q5T197 706 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 TMEM164Q5U3C3 297 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 MEDAGQ5VYS4 303 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 SLX4IPQ5VYV7 408 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 RNLSQ5VYX0 342 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 C12orf73Q69YU5 71 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 C19orf48Q6RUI8 117 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 IGFN1Q86VF2 1251 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 OR56A1Q8NGH5 318 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 NDNFQ8TB73 568 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 RSC1A1Q92681 617 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 Q96MT0 163 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 TAAR9Q96RI9 348 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 TREX2Q9BQ50 279 aaPredicted RBP9.26□□□□□ -0.93
PTPRD-207ENST00000463477 UCK2Q9BZX2 261 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 SLIRPQ9GZT3 109 aaKnown RBP9.26□□□□□ -0.93
PTPRD-207ENST00000463477 MMP27Q9H306 513 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 SLC6A20Q9NP91 592 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 PRDM9Q9NQV7 894 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 CLN6Q9NWW5 311 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 HRASLS2Q9NWW9 162 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 LYARQ9NX58 379 aaKnown RBP9.26□□□□□ -0.93
PTPRD-207ENST00000463477 SEC14L3Q9UDX4 400 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 PISDQ9UG56 409 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 SNX7Q9UNH6 387 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 PCDHGA3Q9Y5H0 932 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 DSPP15924 2871 aaKnown RBP9.25□□□□□ -0.93
PTPRD-207ENST00000463477 KMT2BQ9UMN6 2715 aaPredicted RBP9.25□□□□□ -0.93
PTPRD-207ENST00000463477 A0A0G2JPF8 293 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 OR5K3A6NET4 321 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 A8MU76 341 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 EFCAB9A8MZ26 197 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 HNRNPCL2B2RXH8 293 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 HNRNPCL3B7ZW38 293 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 SYT5O00445 386 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 RRP8O43159 456 aaKnown RBP9.25□□□□□ -0.93
PTPRD-207ENST00000463477 SLC28A2O43868 658 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 FHP07954 510 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 HNRNPCL4P0DMR1 293 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms