RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 RIMKLAQ8IXN7 391 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 SLC35F3Q8IY50 421 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 PGAM4Q8N0Y7 254 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 CDC26Q8NHZ8 85 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 C16orf78Q8WTQ4 265 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 SLC13A3Q8WWT9 602 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 STARD8Q92502 1023 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 TESCQ96BS2 214 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 ROPN1LQ96C74 230 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 PPM1MQ96MI6 270 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 QRFPRQ96P65 431 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 FCRL4Q96PJ5 515 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 SNX18Q96RF0 628 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 CDRT15Q96T59 188 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 PRPF18Q99633 342 aaKnown RBP6.88□□□□□ -1.31
UBE4B-204ENST00000462658 SORBS1Q9BX66 1292 aaKnown RBP6.88□□□□□ -1.31
UBE4B-204ENST00000462658 ABCG4Q9H172 646 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 GAREM1Q9H706 876 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 IL1RL2Q9HB29 575 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 IL21RQ9HBE5 538 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 NLGN3Q9NZ94 848 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 POMT2Q9UKY4 750 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 PRPF19Q9UMS4 504 aaKnown RBP6.88□□□□□ -1.31
UBE4B-204ENST00000462658 COX11Q9Y6N1 276 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 RNF215Q9Y6U7 377 aa6.88□□□□□ -1.31
UBE4B-204ENST00000462658 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.88□□□□□ -1.31
UBE4B-204ENST00000462658 A0A0J9YVX5 310 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 ARHGAP10A1A4S6 786 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 GABRR3A8MPY1 467 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 RTCAO00442 366 aaKnown RBP6.87□□□□□ -1.31
UBE4B-204ENST00000462658 ASNA1O43681 348 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 NUDT21O43809 227 aaKnown RBP6.87□□□□□ -1.31
UBE4B-204ENST00000462658 PRAMEF2O60811 474 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 TNFRSF6BO95407 300 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 NPPAP01160 153 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 COX7A2P14406 83 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 ST6GAL1P15907 406 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 ALDH4A1P30038 563 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 CAPZBP47756 277 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 ARFIP1P53367 373 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 PLA2G16P53816 162 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 OR1D5P58170 312 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 C21orf58P58505 322 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 TAS2R50P59544 299 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 STXBP1P61764 594 aaKnown RBP6.87□□□□□ -1.31
UBE4B-204ENST00000462658 PPP1CAP62136 330 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 RGS1Q08116 209 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 ZNF763Q0D2J5 394 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 C2orf80Q0P641 193 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 ADPRMQ3LIE5 342 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 TOR1AIP1Q5JTV8 583 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 SPANXN4Q5MJ08 99 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 SUMO4Q6EEV6 95 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 C8orf82Q6P1X6 216 aaPredicted RBP6.87□□□□□ -1.31
UBE4B-204ENST00000462658 PRMT9Q6P2P2 845 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 PGBD2Q6P3X8 592 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 SLC2A7Q6PXP3 512 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 VN1R4Q7Z5H5 301 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 ASPGQ86U10 573 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 GPR180Q86V85 440 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 NUDT13Q86X67 352 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 FBXW8Q8N3Y1 598 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 MINDY1Q8N5J2 469 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 DPP10Q8N608 796 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 SUMF1Q8NBK3 374 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 SRFBP1Q8NEF9 429 aaKnown RBP6.87□□□□□ -1.31
UBE4B-204ENST00000462658 OR7A2PQ8NGA2 310 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 OR4C6Q8NH72 309 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 NT5CQ8TCD5 201 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 SAP25Q8TEE9 199 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 NCSTNQ92542 709 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 ATOH1Q92858 354 aaPredicted RBP6.87□□□□□ -1.31
UBE4B-204ENST00000462658 LRRC58Q96CX6 371 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 MS4A6EQ96DS6 147 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 TM4SF19Q96DZ7 209 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 TRAPPC9Q96Q05 1148 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 OR2A5Q96R48 311 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 OR52E6Q96RD3 313 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 HOPXQ9BPY8 73 aaPredicted RBP6.87□□□□□ -1.31
UBE4B-204ENST00000462658 ZNF717Q9BY31 904 aaPredicted RBP6.87□□□□□ -1.31
UBE4B-204ENST00000462658 AICDAQ9GZX7 198 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 KLHL31Q9H511 634 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 DDX31Q9H8H2 851 aaKnown RBP6.87□□□□□ -1.31
UBE4B-204ENST00000462658 MYNNQ9NPC7 610 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 EPHA6Q9UF33 1036 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 PILRAQ9UKJ1 303 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 VPS4AQ9UN37 437 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 WBP11Q9Y2W2 641 aaKnown RBP6.87□□□□□ -1.31
UBE4B-204ENST00000462658 TDRD6O60522 2096 aaKnown RBP6.87□□□□□ -1.31
UBE4B-204ENST00000462658 PCM1Q15154 2024 aa6.87□□□□□ -1.31
UBE4B-204ENST00000462658 IGHV1OR21-1A0A087WYE8 117 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 LOC105369274A0A096LPK9 316 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 A0A0G2JN53 185 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 LOC102723532A0A0G2JNH3 316 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 URADA6NGE7 173 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 SLC9B1P1A6NJY1 282 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 H0YGG7 62 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 TRIM38O00635 465 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 SCAMP2O15127 329 aaKnown RBP6.86□□□□□ -1.31
UBE4B-204ENST00000462658 DHHO43323 396 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms