RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 CDC26Q8NHZ8 85 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 FIG4Q92562 907 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 C18orf12Q96KH6 178 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 C16orf45Q96MC5 204 aaPredicted RBP14.54□□□□□ -0.08
COL7A1-204ENST00000462475 BBS4Q96RK4 519 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 RTN4RQ9BZR6 473 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 DSN1Q9H410 356 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 TAS2R9Q9NYW1 312 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 NDRG3Q9UGV2 375 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 EIF3LQ9Y262 564 aaKnown RBP14.54□□□□□ -0.08
COL7A1-204ENST00000462475 MED12LQ86YW9 2145 aa14.53□□□□□ -0.08
COL7A1-204ENST00000462475 DEFB108AA8MXU0 73 aa14.53□□□□□ -0.08
COL7A1-204ENST00000462475 CTIFO43310 598 aaKnown RBP14.53□□□□□ -0.08
COL7A1-204ENST00000462475 JUNP05412 331 aaKnown RBP14.53□□□□□ -0.08
COL7A1-204ENST00000462475 ENO1P06733 434 aaKnown RBP14.53□□□□□ -0.08
COL7A1-204ENST00000462475 CRHP06850 196 aa14.53□□□□□ -0.08
COL7A1-204ENST00000462475 ANXA4P09525 319 aaPredicted RBP14.53□□□□□ -0.08
COL7A1-204ENST00000462475 INHBBP09529 407 aa14.53□□□□□ -0.08
COL7A1-204ENST00000462475 DDCP20711 480 aa14.53□□□□□ -0.08
COL7A1-204ENST00000462475 IMPDH1P20839 514 aa14.53□□□□□ -0.08
COL7A1-204ENST00000462475 MPIP34949 423 aa14.53□□□□□ -0.08
COL7A1-204ENST00000462475 PRKAA2P54646 552 aa14.53□□□□□ -0.08
COL7A1-204ENST00000462475 FOXA1P55317 472 aa14.53□□□□□ -0.08
COL7A1-204ENST00000462475 SIRPAP78324 504 aa14.53□□□□□ -0.08
COL7A1-204ENST00000462475 LTBQ06643 244 aa14.53□□□□□ -0.08
COL7A1-204ENST00000462475 STX5Q13190 355 aa14.53□□□□□ -0.08
COL7A1-204ENST00000462475 ZNF474Q6S9Z5 364 aaPredicted RBP14.53□□□□□ -0.08
COL7A1-204ENST00000462475 TMEM107Q6UX40 140 aa14.53□□□□□ -0.08
COL7A1-204ENST00000462475 BTLAQ7Z6A9 289 aa14.53□□□□□ -0.08
COL7A1-204ENST00000462475 OR5M1Q8NGP8 315 aa14.53□□□□□ -0.08
COL7A1-204ENST00000462475 WFIKKN1Q96NZ8 548 aa14.53□□□□□ -0.08
COL7A1-204ENST00000462475 STMN4Q9H169 189 aaPredicted RBP14.53□□□□□ -0.08
COL7A1-204ENST00000462475 OPN3Q9H1Y3 402 aaPredicted RBP14.53□□□□□ -0.08
COL7A1-204ENST00000462475 KLHL28Q9NXS3 571 aa14.53□□□□□ -0.08
COL7A1-204ENST00000462475 MED11Q9P086 117 aa14.53□□□□□ -0.08
COL7A1-204ENST00000462475 A0A087WV62 115 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 MYO1GB0I1T2 1018 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 GOLGA8RI6L899 631 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 SEC14L5O43304 696 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 FADS1O60427 444 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 COQ9O75208 318 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 ABHD2P08910 425 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 PEPDP12955 493 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 HK1P19367 917 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 ADSLP30566 484 aaPredicted RBP14.52□□□□□ -0.09
COL7A1-204ENST00000462475 KIR2DL2P43627 348 aaPredicted RBP14.52□□□□□ -0.09
COL7A1-204ENST00000462475 NCBP2P52298 156 aaKnown RBP eCLIP14.52□□□□□ -0.09
COL7A1-204ENST00000462475 SUCLG1P53597 346 aaKnown RBP14.52□□□□□ -0.09
COL7A1-204ENST00000462475 PKNOX1P55347 436 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 MRPS22P82650 360 aaKnown RBP14.52□□□□□ -0.09
COL7A1-204ENST00000462475 ZNF763Q0D2J5 394 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 Q5PR19 223 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 LGSNQ5TDP6 509 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 OR2A2Q6IF42 318 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 CHMP1BQ7LBR1 199 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 MEIOBQ8N635 442 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 ZNF592Q92610 1267 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 L3HYPDHQ96EM0 354 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 PGM2Q96G03 612 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 FAM111AQ96PZ2 611 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 PINK1Q9BXM7 581 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 SHCBP1LQ9BZQ2 653 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 GSTO2Q9H4Y5 243 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 SIRT5Q9NXA8 310 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 C19orf53Q9UNZ5 99 aaPredicted RBP14.52□□□□□ -0.09
COL7A1-204ENST00000462475 STK38LQ9Y2H1 464 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 ZNF337Q9Y3M9 751 aa14.52□□□□□ -0.09
COL7A1-204ENST00000462475 UBFD1O14562 309 aaKnown RBP14.51□□□□□ -0.09
COL7A1-204ENST00000462475 PSMG1O95456 288 aa14.51□□□□□ -0.09
COL7A1-204ENST00000462475 CD79BP40259 229 aa14.51□□□□□ -0.09
COL7A1-204ENST00000462475 GSTM5P46439 218 aa14.51□□□□□ -0.09
COL7A1-204ENST00000462475 CLDN20P56880 219 aa14.51□□□□□ -0.09
COL7A1-204ENST00000462475 C2orf80Q0P641 193 aa14.51□□□□□ -0.09
COL7A1-204ENST00000462475 CYP27C1Q4G0S4 372 aa14.51□□□□□ -0.09
COL7A1-204ENST00000462475 SPDYAQ5MJ70 313 aa14.51□□□□□ -0.09
COL7A1-204ENST00000462475 SHEQ5VZ18 495 aa14.51□□□□□ -0.09
COL7A1-204ENST00000462475 FAM71E1Q6IPT2 247 aa14.51□□□□□ -0.09
COL7A1-204ENST00000462475 LCA5Q86VQ0 697 aa14.51□□□□□ -0.09
COL7A1-204ENST00000462475 SLC22A9Q8IVM8 553 aa14.51□□□□□ -0.09
COL7A1-204ENST00000462475 FNDC9Q8TBE3 224 aa14.51□□□□□ -0.09
COL7A1-204ENST00000462475 PIK3IP1Q96FE7 263 aa14.51□□□□□ -0.09
COL7A1-204ENST00000462475 ZNF845Q96IR2 970 aaPredicted RBP14.51□□□□□ -0.09
COL7A1-204ENST00000462475 MED18Q9BUE0 208 aa14.51□□□□□ -0.09
COL7A1-204ENST00000462475 GLIPR2Q9H4G4 154 aa14.51□□□□□ -0.09
COL7A1-204ENST00000462475 MID1IP1Q9NPA3 183 aa14.51□□□□□ -0.09
COL7A1-204ENST00000462475 NFU1Q9UMS0 254 aa14.51□□□□□ -0.09
COL7A1-204ENST00000462475 ABCG2Q9UNQ0 655 aa14.51□□□□□ -0.09
COL7A1-204ENST00000462475 POLR3HQ9Y535 204 aaPredicted RBP14.51□□□□□ -0.09
COL7A1-204ENST00000462475 SERTM1A2A2V5 107 aa14.5□□□□□ -0.09
COL7A1-204ENST00000462475 OR2M5A3KFT3 312 aa14.5□□□□□ -0.09
COL7A1-204ENST00000462475 H3BML4 177 aa14.5□□□□□ -0.09
COL7A1-204ENST00000462475 UPK1AO00322 258 aa14.5□□□□□ -0.09
COL7A1-204ENST00000462475 CGAP01215 116 aa14.5□□□□□ -0.09
COL7A1-204ENST00000462475 CRYGSP22914 178 aa14.5□□□□□ -0.09
COL7A1-204ENST00000462475 UGT2B10P36537 528 aa14.5□□□□□ -0.09
COL7A1-204ENST00000462475 RFX3P48380 749 aa14.5□□□□□ -0.09
COL7A1-204ENST00000462475 PCYT1AP49585 367 aa14.5□□□□□ -0.09
COL7A1-204ENST00000462475 GANABQ14697 944 aaKnown RBP14.5□□□□□ -0.09
COL7A1-204ENST00000462475 DECR1Q16698 335 aa14.5□□□□□ -0.09
COL7A1-204ENST00000462475 CLEC9AQ6UXN8 241 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms