RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 DECR1Q16698 335 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 RFTN2Q52LD8 501 aaPredicted RBP17.19■□□□□ 0.34
VARS-220ENST00000461874 ANKRD26P1Q6NSI1 321 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 ZNF551Q7Z340 670 aaPredicted RBP17.19■□□□□ 0.34
VARS-220ENST00000461874 HOMEZQ8IX15 550 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 ZZZ3Q8IYH5 903 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 OR4K17Q8NGC6 315 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 SFXN2Q96NB2 322 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 FAM111AQ96PZ2 611 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 UCN2Q96RP3 112 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 LMF2Q9BU23 707 aaKnown RBP17.19■□□□□ 0.34
VARS-220ENST00000461874 REEP4Q9H6H4 257 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 Q9N2J8 555 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 LGALS13Q9UHV8 139 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 FOXD3Q9UJU5 478 aaPredicted RBP17.19■□□□□ 0.34
VARS-220ENST00000461874 DKKL1Q9UK85 242 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 HIVEP1P15822 2718 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 CELSR1Q9NYQ6 3014 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 TTC36A6NLP5 189 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 LSM1O15116 133 aaKnown RBP17.18■□□□□ 0.34
VARS-220ENST00000461874 PDPK1O15530 556 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 SCO2O43819 266 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 NPHS1O60500 1241 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 TBX19O60806 448 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 IL33O95760 270 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 CHRNGP07510 517 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 SDC1P18827 310 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 CHMP24386 653 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 OPRM1P35372 400 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 AGFG1P52594 562 aaKnown RBP17.18■□□□□ 0.34
VARS-220ENST00000461874 HSPB3Q12988 150 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 UGT3A2Q3SY77 523 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 ARL13AQ5H913 290 aaPredicted RBP17.18■□□□□ 0.34
VARS-220ENST00000461874 FADS6Q8N9I5 356 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 CIDECQ96AQ7 238 aaPredicted RBP17.18■□□□□ 0.34
VARS-220ENST00000461874 TSSK3Q96PN8 268 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 G6PC3Q9BUM1 346 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 DSN1Q9H410 356 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 FLRT3Q9NZU0 649 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 CRIM1Q9NZV1 1036 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 PPP4R1LQ9P1A2 415 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 SLC17A7Q9P2U7 560 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 BAIAP2L1Q9UHR4 511 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 MRTO4Q9UKD2 239 aaKnown RBP17.18■□□□□ 0.34
VARS-220ENST00000461874 ABCG2Q9UNQ0 655 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 TMED5Q9Y3A6 229 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 KIAA1549Q9HCM3 1950 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 AKAP6Q13023 2319 aa17.18■□□□□ 0.34
VARS-220ENST00000461874 CLCA1A8K7I4 914 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 TMEM233B4DJY2 109 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 AKAP10O43572 662 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 CTAG2O75638 210 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 TMIGD3P0DMS9 266 aaPredicted RBP17.17■□□□□ 0.34
VARS-220ENST00000461874 ZNF708P17019 499 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 GABRA3P34903 492 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 DGKQP52824 942 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 DSCR4P56555 118 aaPredicted RBP17.17■□□□□ 0.34
VARS-220ENST00000461874 CLDN18P56856 261 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 B3GALT5-AS1P59052 145 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 RPL38P63173 70 aaKnown RBP17.17■□□□□ 0.34
VARS-220ENST00000461874 IFFO1Q0D2I5 559 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 PDE7AQ13946 482 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 ZNF385BQ569K4 471 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 OR2M3Q8NG83 312 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 AENQ8WTP8 325 aaKnown RBP17.17■□□□□ 0.34
VARS-220ENST00000461874 HOXB13Q92826 284 aaPredicted RBP17.17■□□□□ 0.34
VARS-220ENST00000461874 WNT2BQ93097 391 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 PPCDCQ96CD2 204 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 ZFP3Q96NJ6 502 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 TM9SF2Q99805 663 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 MECRQ9BV79 373 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 RTN4RQ9BZR6 473 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 ROPN1BQ9BZX4 212 aaPredicted RBP17.17■□□□□ 0.34
VARS-220ENST00000461874 ROPN1Q9HAT0 212 aaPredicted RBP17.17■□□□□ 0.34
VARS-220ENST00000461874 EML4Q9HC35 981 aaKnown RBP17.17■□□□□ 0.34
VARS-220ENST00000461874 SDHAF3Q9NRP4 125 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 FAM120CQ9NX05 1096 aaKnown RBP17.17■□□□□ 0.34
VARS-220ENST00000461874 JKAMPQ9P055 326 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 RPH3AQ9Y2J0 694 aaPredicted RBP17.17■□□□□ 0.34
VARS-220ENST00000461874 TRAF6Q9Y4K3 522 aa17.17■□□□□ 0.34
VARS-220ENST00000461874 SPAG7O75391 227 aa17.16■□□□□ 0.34
VARS-220ENST00000461874 RCBTB2O95199 551 aa17.16■□□□□ 0.34
VARS-220ENST00000461874 PRPS2P11908 318 aa17.16■□□□□ 0.34
VARS-220ENST00000461874 TCEA1P23193 301 aaKnown RBP17.16■□□□□ 0.34
VARS-220ENST00000461874 FRKP42685 505 aaPredicted RBP17.16■□□□□ 0.34
VARS-220ENST00000461874 PSMD4P55036 377 aaKnown RBP17.16■□□□□ 0.34
VARS-220ENST00000461874 FOXF2Q12947 444 aa17.16■□□□□ 0.34
VARS-220ENST00000461874 BCL2A1Q16548 175 aa17.16■□□□□ 0.34
VARS-220ENST00000461874 DDIASQ8IXT1 998 aa17.16■□□□□ 0.34
VARS-220ENST00000461874 CLHC1Q8NHS4 586 aa17.16■□□□□ 0.34
VARS-220ENST00000461874 ZFP28Q8NHY6 868 aa17.16■□□□□ 0.34
VARS-220ENST00000461874 TCP10LQ8TDR4 215 aa17.16■□□□□ 0.34
VARS-220ENST00000461874 FAM222BQ8WU58 562 aa17.16■□□□□ 0.34
VARS-220ENST00000461874 TWIST2Q8WVJ9 160 aa17.16■□□□□ 0.34
VARS-220ENST00000461874 ZBED6CLQ96FA7 236 aaPredicted RBP17.16■□□□□ 0.34
VARS-220ENST00000461874 C3orf14Q9HBI5 128 aa17.16■□□□□ 0.34
VARS-220ENST00000461874 DNAJB12Q9NXW2 375 aaKnown RBP17.16■□□□□ 0.34
VARS-220ENST00000461874 MED11Q9P086 117 aa17.16■□□□□ 0.34
VARS-220ENST00000461874 SH3BP4Q9P0V3 963 aa17.16■□□□□ 0.34
VARS-220ENST00000461874 NTMQ9P121 344 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms