RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 NRROSQ86YC3 692 aa16.98■□□□□ 0.31
HPS3-202ENST00000460120 MFSD9Q8NBP5 474 aa16.98■□□□□ 0.31
HPS3-202ENST00000460120 TMED9Q9BVK6 235 aa16.98■□□□□ 0.31
HPS3-202ENST00000460120 ZNF624Q9P2J8 865 aaPredicted RBP16.98■□□□□ 0.31
HPS3-202ENST00000460120 HYKKA2RU49 373 aa16.98■□□□□ 0.31
HPS3-202ENST00000460120 SLC35F4A4IF30 521 aa16.98■□□□□ 0.31
HPS3-202ENST00000460120 ZNF670-ZNF695F2Z2N8 137 aa16.98■□□□□ 0.31
HPS3-202ENST00000460120 UBXN7O94888 489 aa16.98■□□□□ 0.31
HPS3-202ENST00000460120 APOA1P02647 267 aa16.98■□□□□ 0.31
HPS3-202ENST00000460120 KIR2DL1P43626 348 aaPredicted RBP16.98■□□□□ 0.31
HPS3-202ENST00000460120 MTNR1AP48039 350 aa16.98■□□□□ 0.31
HPS3-202ENST00000460120 COX10Q12887 443 aa16.98■□□□□ 0.31
HPS3-202ENST00000460120 MLLT11Q13015 90 aaPredicted RBP16.98■□□□□ 0.31
HPS3-202ENST00000460120 GNA13Q14344 377 aa16.98■□□□□ 0.31
HPS3-202ENST00000460120 KCNJ8Q15842 424 aa16.98■□□□□ 0.31
HPS3-202ENST00000460120 TRMT12Q53H54 448 aaKnown RBP16.98■□□□□ 0.31
HPS3-202ENST00000460120 FAM131AQ6UXB0 335 aa16.98■□□□□ 0.31
HPS3-202ENST00000460120 SLC36A4Q6YBV0 504 aa16.98■□□□□ 0.31
HPS3-202ENST00000460120 TMEM64Q6YI46 380 aa16.98■□□□□ 0.31
HPS3-202ENST00000460120 LAPTM4BQ86VI4 370 aa16.98■□□□□ 0.31
HPS3-202ENST00000460120 ZNF761Q86XN6 746 aaPredicted RBP16.98■□□□□ 0.31
HPS3-202ENST00000460120 ZNF681Q96N22 645 aa16.98■□□□□ 0.31
HPS3-202ENST00000460120 TBX5Q99593 518 aa16.98■□□□□ 0.31
HPS3-202ENST00000460120 SMAD5Q99717 465 aaKnown RBP16.98■□□□□ 0.31
HPS3-202ENST00000460120 WBP1LQ9NX94 342 aa16.98■□□□□ 0.31
HPS3-202ENST00000460120 SLC7A7Q9UM01 511 aa16.98■□□□□ 0.31
HPS3-202ENST00000460120 DIMT1Q9UNQ2 313 aaKnown RBP16.98■□□□□ 0.31
HPS3-202ENST00000460120 LRRC72A6NJI9 287 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 H3BQ06 376 aaPredicted RBP16.97■□□□□ 0.31
HPS3-202ENST00000460120 NCR1O76036 304 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 THY1P04216 161 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 HOXB2P14652 356 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 AHRP35869 848 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 CDC20Q12834 499 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 TRAM2Q15035 370 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 SLC35F1Q5T1Q4 408 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 KIAA1324Q6UXG2 1013 aaKnown RBP16.97■□□□□ 0.31
HPS3-202ENST00000460120 OR4Q3Q8NH05 313 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 TMEM163Q8TC26 289 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 SLC35B4Q969S0 331 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 DCLRE1CQ96SD1 692 aaKnown RBP16.97■□□□□ 0.31
HPS3-202ENST00000460120 STARD5Q9NSY2 213 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 TBC1D24Q9ULP9 559 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 MRPS2Q9Y399 296 aaKnown RBP16.97■□□□□ 0.31
HPS3-202ENST00000460120 COLEC10Q9Y6Z7 277 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 LOC105369274A0A096LPK9 316 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 LOC102723532A0A0G2JNH3 316 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 GPR89AB7ZAQ6 455 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 PLRG1O43660 514 aaKnown RBP16.97■□□□□ 0.31
HPS3-202ENST00000460120 ASNA1O43681 348 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 HYAL3O43820 417 aaPredicted RBP16.97■□□□□ 0.31
HPS3-202ENST00000460120 CTSVO60911 334 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 KLF8O95600 359 aaPredicted RBP16.97■□□□□ 0.31
HPS3-202ENST00000460120 PTTG1O95997 202 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 GPR89BP0CG08 455 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 CDH11P55287 796 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 ZNF542PQ5EBM4 170 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 NXNL2Q5VZ03 156 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 ASPGQ86U10 573 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 OR4N4Q8N0Y3 316 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 NLGN4YQ8NFZ3 816 aaPredicted RBP16.97■□□□□ 0.31
HPS3-202ENST00000460120 PIGXQ8TBF5 258 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 SFXN5Q8TD22 340 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 GNPDA2Q8TDQ7 276 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 PIK3R3Q92569 461 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 MTIF3Q9H2K0 278 aaKnown RBP16.97■□□□□ 0.31
HPS3-202ENST00000460120 MED20Q9H944 212 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 TESQ9UGI8 421 aaKnown RBP16.97■□□□□ 0.31
HPS3-202ENST00000460120 SNX7Q9UNH6 387 aa16.97■□□□□ 0.31
HPS3-202ENST00000460120 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.96■□□□□ 0.31
HPS3-202ENST00000460120 LALBAP00709 142 aa16.96■□□□□ 0.31
HPS3-202ENST00000460120 PRG2P13727 222 aa16.96■□□□□ 0.31
HPS3-202ENST00000460120 WNT4P56705 351 aa16.96■□□□□ 0.31
HPS3-202ENST00000460120 ABATP80404 500 aa16.96■□□□□ 0.31
HPS3-202ENST00000460120 LARS2Q15031 903 aaKnown RBP16.96■□□□□ 0.31
HPS3-202ENST00000460120 ARMC4Q5T2S8 1044 aa16.96■□□□□ 0.31
HPS3-202ENST00000460120 ZC3H14Q6PJT7 736 aaKnown RBP16.96■□□□□ 0.31
HPS3-202ENST00000460120 DIO2Q92813 273 aa16.96■□□□□ 0.31
HPS3-202ENST00000460120 GIMAP5Q96F15 307 aa16.96■□□□□ 0.31
HPS3-202ENST00000460120 SLC38A2Q96QD8 506 aa16.96■□□□□ 0.31
HPS3-202ENST00000460120 HDHD5Q9BXW7 423 aa16.96■□□□□ 0.31
HPS3-202ENST00000460120 ACTRT3Q9BYD9 372 aa16.96■□□□□ 0.31
HPS3-202ENST00000460120 FBXO34Q9NWN3 711 aa16.96■□□□□ 0.31
HPS3-202ENST00000460120 A0A1W2PQL4 384 aaPredicted RBP16.96■□□□□ 0.3
HPS3-202ENST00000460120 CASC3O15234 703 aaKnown RBP16.96■□□□□ 0.3
HPS3-202ENST00000460120 MSL3P1P0C860 447 aa16.96■□□□□ 0.3
HPS3-202ENST00000460120 RCVRNP35243 200 aa16.96■□□□□ 0.3
HPS3-202ENST00000460120 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.96■□□□□ 0.3
HPS3-202ENST00000460120 ST3GAL3Q11203 375 aa16.96■□□□□ 0.3
HPS3-202ENST00000460120 SRSF5Q13243 272 aaKnown RBP16.96■□□□□ 0.3
HPS3-202ENST00000460120 AGERQ15109 404 aa16.96■□□□□ 0.3
HPS3-202ENST00000460120 DUSP5Q16690 384 aa16.96■□□□□ 0.3
HPS3-202ENST00000460120 NDUFA9Q16795 377 aa16.96■□□□□ 0.3
HPS3-202ENST00000460120 FCRLBQ6BAA4 426 aa16.96■□□□□ 0.3
HPS3-202ENST00000460120 ZNF425Q6IV72 752 aa16.96■□□□□ 0.3
HPS3-202ENST00000460120 GDF7Q7Z4P5 450 aa16.96■□□□□ 0.3
HPS3-202ENST00000460120 LRRC25Q8N386 305 aaPredicted RBP16.96■□□□□ 0.3
HPS3-202ENST00000460120 OR5T3Q8NGG3 340 aa16.96■□□□□ 0.3
HPS3-202ENST00000460120 SLC41A3Q96GZ6 507 aa16.96■□□□□ 0.3
HPS3-202ENST00000460120 KLHL28Q9NXS3 571 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms