RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 NTSP30990 170 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 SNRPD2P62316 118 aaKnown RBP13.24□□□□□ -0.29
SCFD1-203ENST00000458591 PRDX1Q06830 199 aaKnown RBP13.24□□□□□ -0.29
SCFD1-203ENST00000458591 SLC9A5Q14940 896 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 MINDY4Q4G0A6 757 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 PPP2R2DQ66LE6 453 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 LYPD8Q6UX82 237 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 HSDL2Q6YN16 418 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 OR4N5Q8IXE1 308 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 SIRT6Q8N6T7 355 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 YIPF7Q8N8F6 280 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 BMPERQ8N8U9 685 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 IL17RCQ8NAC3 791 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 GNPDA2Q8TDQ7 276 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 COL26A1Q96A83 441 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 KIAA1143Q96AT1 154 aaPredicted RBP13.24□□□□□ -0.29
SCFD1-203ENST00000458591 CAMK1GQ96NX5 476 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 GFM1Q96RP9 751 aaKnown RBP13.24□□□□□ -0.29
SCFD1-203ENST00000458591 RNF32Q9H0A6 362 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 RPRD1BQ9NQG5 326 aaKnown RBP13.24□□□□□ -0.29
SCFD1-203ENST00000458591 DEC1Q9P2X7 70 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 APOBEC3BQ9UH17 382 aaKnown RBP13.24□□□□□ -0.29
SCFD1-203ENST00000458591 ALG5Q9Y673 324 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 GSAPA4D1B5 854 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 SYNDIG1LA6NDD5 238 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 KDM4EB2RXH2 506 aaPredicted RBP13.24□□□□□ -0.29
SCFD1-203ENST00000458591 GABRPO00591 440 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 AKR7A2O43488 359 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 GNRH1P01148 92 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 ALPPP05187 535 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 TBXA2RP21731 343 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 GABRA5P31644 462 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 CTNNB1P35222 781 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 LRRC32Q14392 662 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 CCDC85BQ15834 202 aaPredicted RBP13.24□□□□□ -0.29
SCFD1-203ENST00000458591 TATDN3Q17R31 274 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 SYCE2Q6PIF2 218 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 NUP43Q8NFH3 380 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 AP3S1Q92572 193 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 DIO2Q92813 273 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 UPRTQ96BW1 309 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 SECISBP2Q96T21 854 aaKnown RBP13.24□□□□□ -0.29
SCFD1-203ENST00000458591 PPIL3Q9H2H8 161 aaKnown RBP13.24□□□□□ -0.29
SCFD1-203ENST00000458591 BCL2L10Q9HD36 194 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 PRSS16Q9NQE7 514 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 TMEM74BQ9NUR3 256 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 TAS2R7Q9NYW3 318 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 SZT2Q5T011 3432 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 NUMA1Q14980 2115 aa13.24□□□□□ -0.29
SCFD1-203ENST00000458591 TBC1D3BA6NDS4 549 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 SURF4O15260 269 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 MID1O15344 667 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 CPNE3O75131 537 aaKnown RBP13.23□□□□□ -0.29
SCFD1-203ENST00000458591 HIST1H1TP22492 207 aaPredicted RBP13.23□□□□□ -0.29
SCFD1-203ENST00000458591 ATP5A1P25705 553 aaKnown RBP13.23□□□□□ -0.29
SCFD1-203ENST00000458591 DRD3P35462 400 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 AHRP35869 848 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 GALK2Q01415 458 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 CSTF1Q05048 431 aaKnown RBP13.23□□□□□ -0.29
SCFD1-203ENST00000458591 TSPAN31Q12999 210 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 EFR3AQ14156 821 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 FGL2Q14314 439 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 ARHGAP19Q14CB8 494 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 MLC1Q15049 377 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 AGERQ15109 404 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 YIF1BQ5BJH7 314 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 CCNJQ5T5M9 372 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 FAM27D1Q5T7N8 215 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 LCN1P1Q5VSP4 162 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 AADACL4Q5VUY2 407 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 ABHD17CQ6PCB6 329 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 FAM111BQ6SJ93 734 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 TMEM91Q6ZNR0 172 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 PEX5LQ8IYB4 626 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 ARIH2OSQ8N7S6 290 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 SLC16A11Q8NCK7 471 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 OR51G2Q8NGK0 314 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 ZNF707Q96C28 371 aaPredicted RBP13.23□□□□□ -0.29
SCFD1-203ENST00000458591 OTUB2Q96DC9 234 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 SLC35A4Q96G79 324 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 SAMD8Q96LT4 415 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 PINK1Q9BXM7 581 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 MRPS18AQ9NVS2 196 aaKnown RBP13.23□□□□□ -0.29
SCFD1-203ENST00000458591 SLC27A6Q9Y2P4 619 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 KIF26AQ9ULI4 1882 aaPredicted RBP13.23□□□□□ -0.29
SCFD1-203ENST00000458591 LANCL1O43813 399 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 ADH1CP00326 375 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 CHRNB1P11230 501 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 PEBP1P30086 187 aaKnown RBP13.23□□□□□ -0.29
SCFD1-203ENST00000458591 ATP6V1E1P36543 226 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 MAP2K3P46734 347 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 AGFG1P52594 562 aaKnown RBP13.23□□□□□ -0.29
SCFD1-203ENST00000458591 RPA4Q13156 261 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 NDUFA9Q16795 377 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 FCRLBQ6BAA4 426 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 RRM2BQ7LG56 351 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 CPOQ8IVL8 374 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 CADM2Q8N3J6 435 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 KCT2Q8NC54 265 aa13.23□□□□□ -0.29
SCFD1-203ENST00000458591 NEIL3Q8TAT5 605 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms