RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 YIPF4Q9BSR8 244 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 RBM4Q9BWF3 364 aaKnown RBP8.33□□□□□ -1.08
VPS50-207ENST00000458530 PINK1Q9BXM7 581 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 TGIF2Q9GZN2 237 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 SERHL2Q9H4I8 314 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 SIDT1Q9NXL6 827 aaKnown RBP8.33□□□□□ -1.08
VPS50-207ENST00000458530 KLHL28Q9NXS3 571 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 DHCR7Q9UBM7 475 aaKnown RBP8.33□□□□□ -1.08
VPS50-207ENST00000458530 ZNF639Q9UID6 485 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 ZNF232Q9UNY5 417 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 IFT52Q9Y366 437 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 PCDHGA8Q9Y5G5 932 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 GPC6Q9Y625 555 aaPredicted RBP8.33□□□□□ -1.08
VPS50-207ENST00000458530 MAU2Q9Y6X3 613 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 MYO9AB2RTY4 2548 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 COL12A1Q99715 3063 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 NOTCH2Q04721 2471 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 AHCTF1Q8WYP5 2266 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 A0A1W2PS29 197 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 EFCAB7A8K855 629 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 SYT5O00445 386 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 TERTO14746 1132 aaKnown RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 POLR1CO15160 346 aaPredicted RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 DNAJB6O75190 326 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 STX11O75558 287 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 CDC123O75794 336 aaPredicted RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 DNAJB5O75953 348 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 MFN2O95140 757 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 H6PDO95479 791 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 C1QCP02747 245 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 OPN1SWP03999 348 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 GUSBP08236 651 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 CD63P08962 238 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 FGF5P12034 268 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 FPR1P21462 350 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 DNAJA1P31689 397 aaKnown RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 OR1D4P47884 311 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 MAN2A2P49641 1150 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 ALDH3A2P51648 485 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 RAD23AP54725 363 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 PSMD4P55036 377 aaKnown RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 RAB15P59190 212 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 CXADRP78310 365 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 POU6F2P78424 691 aaPredicted RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 KCNJ10P78508 379 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 DCDP81605 110 aaKnown RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 ZFP36L1Q07352 338 aaKnown RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 DAG1Q14118 895 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 LARS2Q15031 903 aaKnown RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 SYPL1Q16563 259 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 NKG7Q16617 165 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 SYT16Q17RD7 645 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 ZSWIM7Q19AV6 140 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 TRMT12Q53H54 448 aaKnown RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 SFT2D3Q587I9 215 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 RPS26P11Q5JNZ5 115 aaPredicted RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 HEPHL1Q6MZM0 1159 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 MRPL14Q6P1L8 145 aaKnown RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 SHQ1Q6PI26 577 aaKnown RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 TMPRSS9Q7Z410 1059 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 GALNT10Q86SR1 603 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 KBTBD2Q8IY47 623 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 GALNT4Q8N4A0 578 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 CBR4Q8N4T8 237 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 RCBTB1Q8NDN9 531 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 CHDHQ8NE62 594 aaPredicted RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 OR14A16Q8NHC5 309 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 OIT3Q8WWZ8 545 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 CDS1Q92903 461 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 DAZLQ92904 295 aaKnown RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 ZNF597Q96LX8 424 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 NR1H4Q96RI1 486 aaPredicted RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 EPYCQ99645 322 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 CMKLR1Q99788 373 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 LMF2Q9BU23 707 aaKnown RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 CNPPD1Q9BV87 410 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 COQ10BQ9H8M1 238 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 Q9N2J8 555 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 LANCL2Q9NS86 450 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 SMPD3Q9NY59 655 aaPredicted RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 KIF17Q9P2E2 1029 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 COPS7AQ9UBW8 275 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 ENOPH1Q9UHY7 261 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 MRTO4Q9UKD2 239 aaKnown RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 NXT1Q9UKK6 140 aaKnown RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 SAMHD1Q9Y3Z3 626 aaKnown RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 WDR45Q9Y484 360 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 CLCA3PQ9Y6N3 262 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 ENPP4Q9Y6X5 453 aa8.32□□□□□ -1.08
VPS50-207ENST00000458530 COL27A1Q8IZC6 1860 aaPredicted RBP8.32□□□□□ -1.08
VPS50-207ENST00000458530 SPTAN1Q13813 2472 aaKnown RBP8.31□□□□□ -1.08
VPS50-207ENST00000458530 DSPPQ9NZW4 1301 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 DOPEY2Q9Y3R5 2298 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 IGLV3-12A0A075B6K2 115 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 IGKV3D-11A0A0A0MRZ8 115 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 A8MVJ9 347 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 C17orf105B2RV13 164 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 B4E171 279 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 C9J4A7 227 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 hCG_2039718K7EN88 272 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms