RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 C14orf119Q9NWQ9 140 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 MARCH4Q9P2E8 410 aaPredicted RBP1.88□□□□□ -2.11
NEDD1-204ENST00000457368 SAE1Q9UBE0 346 aaPredicted RBP1.88□□□□□ -2.11
NEDD1-204ENST00000457368 COPS7AQ9UBW8 275 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 DAPP1Q9UN19 280 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 MGAT4BQ9UQ53 548 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 TCAF1Q9Y4C2 921 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 MMP24Q9Y5R2 645 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 BIRC6Q9NR09 4857 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 WNK1Q9H4A3 2382 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 SLC22A20A6NK97 555 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 SHISA9B4DS77 424 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 CD3EAPO15446 510 aaKnown RBP1.88□□□□□ -2.11
NEDD1-204ENST00000457368 ZBTB14O43829 449 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 SSX4O60224 188 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 CLPSP04118 112 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 C8GP07360 202 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 CCDC166P0CW27 439 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 APEHP13798 732 aaKnown RBP1.88□□□□□ -2.11
NEDD1-204ENST00000457368 CNTFP26441 200 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 GJC1P36383 396 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 GDF5P43026 501 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 PDLIM4P50479 330 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 HNRNPFP52597 415 aaKnown RBP1.88□□□□□ -2.11
NEDD1-204ENST00000457368 ARFIP1P53367 373 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 CDH15P55291 814 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 TPD52P55327 224 aaPredicted RBP1.88□□□□□ -2.11
NEDD1-204ENST00000457368 B3GALT5-AS1P59052 145 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 STXBP1P61764 594 aaKnown RBP1.88□□□□□ -2.11
NEDD1-204ENST00000457368 PSPHP78330 225 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 OLR1P78380 273 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 LGALS3BPQ08380 585 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 KCNJ11Q14654 390 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 POU6F1Q14863 301 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 KLHL38Q2WGJ6 581 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 NRN1LQ496H8 165 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 FAM182AQ5T1J6 154 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 KPRPQ5T749 579 aaPredicted RBP1.88□□□□□ -2.11
NEDD1-204ENST00000457368 PRAMEF20Q5VT98 475 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 PLXDC2Q6UX71 529 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 RBM43Q6ZSC3 357 aaKnown RBP1.88□□□□□ -2.11
NEDD1-204ENST00000457368 MICALCLQ6ZW33 695 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 NUP54Q7Z3B4 507 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 TDRPQ86YL5 185 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 REXO1L1PQ8IX06 675 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 RHOT2Q8IXI1 618 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 SAMD14Q8IZD0 417 aaPredicted RBP1.88□□□□□ -2.11
NEDD1-204ENST00000457368 PCYOX1LQ8NBM8 494 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 KCNJ9Q92806 393 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 HAUS1Q96CS2 278 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 SENP5Q96HI0 755 aaPredicted RBP1.88□□□□□ -2.11
NEDD1-204ENST00000457368 RILPQ96NA2 401 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 KCNJ15Q99712 375 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 BAG1Q99933 345 aaPredicted RBP1.88□□□□□ -2.11
NEDD1-204ENST00000457368 MACROD1Q9BQ69 325 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 TACO1Q9BSH4 297 aaKnown RBP1.88□□□□□ -2.11
NEDD1-204ENST00000457368 ALOXE3Q9BYJ1 711 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 ROGDIQ9GZN7 287 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 WWTR1Q9GZV5 400 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 C12orf65Q9H3J6 166 aaKnown RBP1.88□□□□□ -2.11
NEDD1-204ENST00000457368 ACTR8Q9H981 624 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 LIN28AQ9H9Z2 209 aaKnown RBP1.88□□□□□ -2.11
NEDD1-204ENST00000457368 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.88□□□□□ -2.11
NEDD1-204ENST00000457368 NSMCE4AQ9NXX6 385 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 CHMP5Q9NZZ3 219 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 CTTNBP2NLQ9P2B4 639 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 CGGBP1Q9UFW8 167 aaPredicted RBP1.88□□□□□ -2.11
NEDD1-204ENST00000457368 GIMAP2Q9UG22 337 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 TMEFF2Q9UIK5 374 aaPredicted RBP1.88□□□□□ -2.11
NEDD1-204ENST00000457368 EXO1Q9UQ84 846 aaKnown RBP1.88□□□□□ -2.11
NEDD1-204ENST00000457368 RUVBL2Q9Y230 463 aaKnown RBP1.88□□□□□ -2.11
NEDD1-204ENST00000457368 ZKSCAN5Q9Y2L8 839 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 MED16Q9Y2X0 877 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP1.88□□□□□ -2.11
NEDD1-204ENST00000457368 X6R8D5 127 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 HEATR5BQ9P2D3 2071 aa1.88□□□□□ -2.11
NEDD1-204ENST00000457368 YLPM1P49750 1951 aaKnown RBP1.87□□□□□ -2.11
NEDD1-204ENST00000457368 A0A087WV62 115 aa1.87□□□□□ -2.11
NEDD1-204ENST00000457368 LOC390937A0A1W2PQ73 354 aa1.87□□□□□ -2.11
NEDD1-204ENST00000457368 DPRXA6NFQ7 191 aa1.87□□□□□ -2.11
NEDD1-204ENST00000457368 C17orf105B2RV13 164 aa1.87□□□□□ -2.11
NEDD1-204ENST00000457368 C4orf51C9J302 202 aa1.87□□□□□ -2.11
NEDD1-204ENST00000457368 ZNF561-AS1K7EIQ3 104 aa1.87□□□□□ -2.11
NEDD1-204ENST00000457368 PFDN6O15212 129 aa1.87□□□□□ -2.11
NEDD1-204ENST00000457368 OR1F1O43749 312 aa1.87□□□□□ -2.11
NEDD1-204ENST00000457368 B3GALT2O43825 422 aa1.87□□□□□ -2.11
NEDD1-204ENST00000457368 KIAA0513O60268 411 aa1.87□□□□□ -2.11
NEDD1-204ENST00000457368 NDUFS3O75489 264 aa1.87□□□□□ -2.11
NEDD1-204ENST00000457368 GCM2O75603 506 aaPredicted RBP1.87□□□□□ -2.11
NEDD1-204ENST00000457368 TRAPPC6AO75865 159 aa1.87□□□□□ -2.11
NEDD1-204ENST00000457368 PGM3O95394 542 aa1.87□□□□□ -2.11
NEDD1-204ENST00000457368 DHRS4L1P0CG22 281 aa1.87□□□□□ -2.11
NEDD1-204ENST00000457368 CDH1P12830 882 aa1.87□□□□□ -2.11
NEDD1-204ENST00000457368 ATP6V1B1P15313 513 aa1.87□□□□□ -2.11
NEDD1-204ENST00000457368 TNFSF4P23510 183 aa1.87□□□□□ -2.11
NEDD1-204ENST00000457368 PEX2P28328 305 aa1.87□□□□□ -2.11
NEDD1-204ENST00000457368 TTKP33981 857 aa1.87□□□□□ -2.11
NEDD1-204ENST00000457368 LIM2P55344 173 aa1.87□□□□□ -2.11
NEDD1-204ENST00000457368 AP1S2P56377 157 aa1.87□□□□□ -2.11
NEDD1-204ENST00000457368 CLDN15P56746 228 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms