RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 OMPP47874 163 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 ETV1P50549 477 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 ST3GAL3Q11203 375 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 RUNX2Q13950 521 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 KLHL22Q53GT1 634 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 C3orf38Q5JPI3 329 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 SPANXN2Q5MJ10 180 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 THOC7Q6I9Y2 204 aaKnown RBP17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 USP30Q70CQ3 517 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 RD3Q7Z3Z2 195 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 PHC2Q8IXK0 858 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 OR52P1PQ8NH57 321 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 CHAC2Q8WUX2 184 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 FGF20Q9NP95 211 aaPredicted RBP17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 TRBV23OR9-2A0A075B6M9 112 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 PNMA8CA0A1B0GUJ8 204 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 DUXAA6NLW8 204 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 WWP2O00308 870 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 MYL12BO14950 172 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 P2RX6O15547 441 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 UBXN7O94888 489 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 CPN2P22792 545 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 C1DQ13901 141 aaKnown RBP17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 COL9A2Q14055 689 aaPredicted RBP17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 FLYWCH1Q4VC44 716 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 PRRT3Q5FWE3 981 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 CDC73Q6P1J9 531 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 SLC27A4Q6P1M0 643 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 ZNF730Q6ZMV8 503 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 FRRS1Q6ZNA5 592 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 SLC16A11Q8NCK7 471 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 TEX47Q8TBZ9 253 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 MS4A4EQ96PG1 132 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 SERINC2Q96SA4 455 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 KCNS3Q9BQ31 491 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 BARHL1Q9BZE3 327 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 S1PR5Q9H228 398 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 PRO3102Q9H379 93 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 CRNNQ9UBG3 495 aaPredicted RBP17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 PHF11Q9UIL8 331 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 NCKAP1Q9Y2A7 1128 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 SCN3AQ9NY46 2000 aa17.18■□□□□ 0.34
SEMA3B-209ENST00000456560 HYKKA2RU49 373 aa17.18■□□□□ 0.34
SEMA3B-209ENST00000456560 ZNF670-ZNF695F2Z2N8 137 aa17.18■□□□□ 0.34
SEMA3B-209ENST00000456560 CTSVO60911 334 aa17.18■□□□□ 0.34
SEMA3B-209ENST00000456560 DNAJB6O75190 326 aa17.18■□□□□ 0.34
SEMA3B-209ENST00000456560 SLC35G6P0C7Q6 338 aa17.18■□□□□ 0.34
SEMA3B-209ENST00000456560 CCNYL3P0C7X3 344 aa17.18■□□□□ 0.34
SEMA3B-209ENST00000456560 ACP2P11117 423 aa17.18■□□□□ 0.34
SEMA3B-209ENST00000456560 SOX18P35713 384 aa17.18■□□□□ 0.34
SEMA3B-209ENST00000456560 ACTR1BP42025 376 aa17.18■□□□□ 0.34
SEMA3B-209ENST00000456560 ACTR1AP61163 376 aa17.18■□□□□ 0.34
SEMA3B-209ENST00000456560 DECR1Q16698 335 aa17.18■□□□□ 0.34
SEMA3B-209ENST00000456560 FCRL6Q6DN72 434 aa17.18■□□□□ 0.34
SEMA3B-209ENST00000456560 SLC36A4Q6YBV0 504 aa17.18■□□□□ 0.34
SEMA3B-209ENST00000456560 OR2L13Q8N349 312 aa17.18■□□□□ 0.34
SEMA3B-209ENST00000456560 IL17RDQ8NFM7 739 aa17.18■□□□□ 0.34
SEMA3B-209ENST00000456560 OR4K14Q8NGD5 310 aa17.18■□□□□ 0.34
SEMA3B-209ENST00000456560 SDHCQ99643 169 aaPredicted RBP17.18■□□□□ 0.34
SEMA3B-209ENST00000456560 TMEM168Q9H0V1 697 aa17.18■□□□□ 0.34
SEMA3B-209ENST00000456560 CD93Q9NPY3 652 aa17.18■□□□□ 0.34
SEMA3B-209ENST00000456560 GSAPA4D1B5 854 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 PRODHO43272 600 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 THY1P04216 161 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 UGT2B7P16662 529 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 CTHP32929 405 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 AVPR1BP47901 424 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 RAB40BQ12829 278 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 MAP4K2Q12851 820 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 SUZ12Q15022 739 aaKnown RBP17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 AGAP6Q5VW22 663 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 UTS2BQ765I0 119 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 NKAIN4Q8IVV8 208 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 SAMD14Q8IZD0 417 aaPredicted RBP17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 PIGXQ8TBF5 258 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 CDS1Q92903 461 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 FAM46AQ96IP4 442 aaKnown RBP17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 AGAP4Q96P64 663 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 TRIM45Q9H8W5 580 aaPredicted RBP17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 MTHFD2LQ9H903 347 aaPredicted RBP17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 SMURF1Q9HCE7 757 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 KLHL28Q9NXS3 571 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 CNIH4Q9P003 139 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 PILRAQ9UKJ1 303 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 NTNG1Q9Y2I2 539 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 NOX1Q9Y5S8 564 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 KDM4EB2RXH2 506 aaPredicted RBP17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 LOC110117498-PIK3R3F6TDL0 507 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 RGS13O14921 159 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 KLF4O43474 513 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 AGR2O95994 175 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 CPEP16870 476 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 HOXC5Q00444 222 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 LIPKQ5VXJ0 399 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 SIMC1Q8NDZ2 872 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 ACOT11Q8WXI4 607 aaPredicted RBP17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 PIK3R3Q92569 461 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 RNFT2Q96EX2 444 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 PRDM9Q9NQV7 894 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 CLEC1BQ9P126 229 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms