RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 ALDOBP05062 364 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 URODP06132 367 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 NPPBP16860 134 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 PTNP21246 168 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 VIPR1P32241 457 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 TRIM23P36406 574 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 MMP12P39900 470 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 CTSOP43234 321 aaPredicted RBP9.68□□□□□ -0.86
CLIP4-208ENST00000456385 SPINT3P49223 89 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 BLVRAP53004 296 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 TBPL1P62380 186 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 OPCMLQ14982 345 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 TCTE1Q5JU00 501 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 SFRP5Q5T4F7 317 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 RETSATQ6NUM9 610 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 SFXN4Q6P4A7 337 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 SMARCD3Q6STE5 483 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 ZNF322Q6U7Q0 402 aaPredicted RBP9.68□□□□□ -0.86
CLIP4-208ENST00000456385 ZNF783Q6ZMS7 281 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 Q6ZTK2 550 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 SIRT6Q8N6T7 355 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 ZNF480Q8WV37 535 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 XAGE5Q8WWM1 108 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 FAM46AQ96IP4 442 aaKnown RBP9.68□□□□□ -0.86
CLIP4-208ENST00000456385 ERMAPQ96PL5 475 aaPredicted RBP9.68□□□□□ -0.86
CLIP4-208ENST00000456385 SLC22A12Q96S37 553 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 TBX5Q99593 518 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 C19orf43Q9BQ61 176 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 C2orf49Q9BVC5 232 aaPredicted RBP9.68□□□□□ -0.86
CLIP4-208ENST00000456385 SYNDIG1Q9H7V2 258 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 DDX31Q9H8H2 851 aaKnown RBP9.68□□□□□ -0.86
CLIP4-208ENST00000456385 ASB6Q9NWX5 421 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 MRPL15Q9P015 296 aaKnown RBP9.68□□□□□ -0.86
CLIP4-208ENST00000456385 POMT2Q9UKY4 750 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 LIPT1Q9Y234 373 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 CSNK1G3Q9Y6M4 447 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 DOCK6Q96HP0 2047 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 IRGMA1A4Y4 181 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 ZC3H12DA2A288 527 aaKnown RBP9.67□□□□□ -0.86
CLIP4-208ENST00000456385 SLC9B1P1A6NJY1 282 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 FAM183AA6NL82 134 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 SOCS6O14544 535 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 ZNF197O14709 1029 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 MMP20O60882 483 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 RGS9O75916 674 aaPredicted RBP9.67□□□□□ -0.86
CLIP4-208ENST00000456385 GAAP10253 952 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 CXCL2P19875 107 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 PTGER1P34995 402 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 MTNR1BP49286 362 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 CTSCP53634 463 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 KIAA1024LP59773 190 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 SIM1P81133 766 aaPredicted RBP9.67□□□□□ -0.86
CLIP4-208ENST00000456385 SMAD3P84022 425 aaKnown RBP9.67□□□□□ -0.86
CLIP4-208ENST00000456385 GRIN2CQ14957 1233 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 NDUFA9Q16795 377 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 SYTL3Q4VX76 610 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 AADACL4Q5VUY2 407 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 LRFN4Q6PJG9 635 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 TFAP2EQ6VUC0 442 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 RASSF6Q6ZTQ3 369 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 PRSS45Q7RTY3 260 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 TMEM173Q86WV6 379 aaPredicted RBP9.67□□□□□ -0.86
CLIP4-208ENST00000456385 TBC1D19Q8N5T2 526 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 OR51G2Q8NGK0 314 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 MOSPD2Q8NHP6 518 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 RPLP0P6Q8NHW5 317 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 THAP4Q8WY91 577 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 PIGKQ92643 395 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 KLK6Q92876 244 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 ECHDC3Q96DC8 303 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 WDR89Q96FK6 387 aaPredicted RBP9.67□□□□□ -0.86
CLIP4-208ENST00000456385 FCRL4Q96PJ5 515 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 SLC38A2Q96QD8 506 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 ZNF607Q96SK3 696 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 KLF16Q9BXK1 252 aaPredicted RBP9.67□□□□□ -0.86
CLIP4-208ENST00000456385 QRSL1Q9H0R6 528 aaKnown RBP9.67□□□□□ -0.86
CLIP4-208ENST00000456385 BRD7Q9NPI1 651 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 CFAP97Q9P2B7 532 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 B4GALT6Q9UBX8 382 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 KIF25Q9UIL4 384 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 HRH3Q9Y5N1 445 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 PLXND1Q9Y4D7 1925 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 XIRP2A4UGR9 3374 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 INPPL1O15357 1258 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 CHST10O43529 356 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 FRS3O43559 492 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 GATBO75879 557 aaKnown RBP9.67□□□□□ -0.86
CLIP4-208ENST00000456385 IGSF6O95976 241 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 LPLP06858 475 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 GNSP15586 552 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 PBLDP30039 288 aaPredicted RBP9.67□□□□□ -0.86
CLIP4-208ENST00000456385 RPL3P39023 403 aaKnown RBP9.67□□□□□ -0.86
CLIP4-208ENST00000456385 MAPK9P45984 424 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 GATMP50440 423 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 TPMTP51580 245 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 COL9A2Q14055 689 aaPredicted RBP9.67□□□□□ -0.86
CLIP4-208ENST00000456385 SHEQ5VZ18 495 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 SFRP4Q6FHJ7 346 aaPredicted RBP9.67□□□□□ -0.86
CLIP4-208ENST00000456385 PYHIN1Q6K0P9 492 aa9.67□□□□□ -0.86
CLIP4-208ENST00000456385 RGS7BPQ6MZT1 257 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms