RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 C19orf25Q9UFG5 118 aaPredicted RBP6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 SH3GLB1Q9Y371 365 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 PCDHGB1Q9Y5G3 927 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 CLDN16Q9Y5I7 305 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 UNC13CQ8NB66 2214 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 IRGMA1A4Y4 181 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 SH3PXD2BA1X283 911 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 NPIPB9F8W1W9 429 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 PRKRAO75569 313 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 RECKO95980 971 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 IL7RP16871 459 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 AGXTP21549 392 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 SOX18P35713 384 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 MPLP40238 635 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 UGT2B15P54855 530 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 RAB15P59190 212 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 ISL1P61371 349 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 RPS26P62854 115 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 DCDP81605 110 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 MC2RQ01718 297 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 RHAGQ02094 409 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 MVKQ03426 396 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 OCA2Q04671 838 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 ANGPT1Q15389 498 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 LTB4RQ15722 352 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 TRMT12Q53H54 448 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 C1orf94Q6P1W5 598 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 OVCH1Q7RTY7 1134 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 DND1Q8IYX4 353 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 SLC16A11Q8NCK7 471 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 OR5T3Q8NGG3 340 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 OR5D16Q8NGK9 328 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 Q96MT0 163 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 RACGAP1Q9H0H5 632 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 SCN3BQ9NY72 215 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 A4GNTQ9UNA3 340 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 GPR55Q9Y2T6 319 aaPredicted RBP6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 PCDHGA1Q9Y5H4 931 aa6.36□□□□□ -1.39
ECHDC1-210ENST00000454859 NINQ8N4C6 2090 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 CABIN1Q9Y6J0 2220 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 A0A1W2PQ72 361 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 A0A1W2PQD3 144 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 TRAPPC13A5PLN9 417 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 CDHR4A6H8M9 788 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 ZNF860A6NHJ4 632 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 VSTM2BA6NLU5 285 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 D6RAR5 112 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 HCRTR1O43613 425 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 LDB3O75112 727 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 KCNK2O95069 426 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 LDOC1O95751 146 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 STATHP02808 62 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 IGKV3-11P04433 115 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 CCNYL3P0C7X3 344 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 OSMP13725 252 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 FOLR1P15328 257 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 ELAVL4P26378 380 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 CSTF2P33240 577 aaKnown RBP eCLIP6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 GABRA3P34903 492 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 SOX11P35716 441 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 GGT2P36268 569 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 ATP12AP54707 1039 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 CDH12P55289 794 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 TPD52P55327 224 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 RGS8P57771 180 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 CCL7P80098 99 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 CHRNEQ04844 493 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 ZNF155Q12901 538 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 EIF3IQ13347 325 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 DEFB110Q30KQ9 67 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 AMZ1Q400G9 498 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 ANKDD1AQ495B1 522 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 C6orf141Q5SZD1 244 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 NKAIN2Q5VXU1 208 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 GUSBP11Q6P575 273 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 ZNF773Q6PK81 442 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 TTLL10Q6ZVT0 673 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 TMEM179BQ7Z7N9 219 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 PPP1R3BQ86XI6 285 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 MISPQ8IVT2 679 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 TMEM151BQ8IW70 566 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 EID2Q8N6I1 236 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 LSMEM1Q8N8F7 131 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 Q8N9G6 341 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 TMEM52Q8NDY8 209 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 OR52R1Q8NGF1 315 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 GNPDA2Q8TDQ7 276 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 GPR151Q8TDV0 419 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 ACOT11Q8WXI4 607 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 SLC9A6Q92581 669 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 CDS1Q92903 461 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 C16orf58Q96GQ5 468 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 PTCHD1Q96NR3 888 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 UCK2Q9BZX2 261 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 OR10A5Q9H207 317 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 MED17Q9NVC6 651 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 VNN3Q9NY84 501 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 HCN3Q9P1Z3 774 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 COPS7AQ9UBW8 275 aa6.35□□□□□ -1.39
ECHDC1-210ENST00000454859 GMPPBQ9Y5P6 360 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms