RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 OR52N2Q8NGI0 321 aa18.26■□□□□ 0.51
COL9A3-202ENST00000452372 GPR151Q8TDV0 419 aa18.26■□□□□ 0.51
COL9A3-202ENST00000452372 STON2Q8WXE9 905 aa18.26■□□□□ 0.51
COL9A3-202ENST00000452372 SLC9A6Q92581 669 aa18.26■□□□□ 0.51
COL9A3-202ENST00000452372 EFHD2Q96C19 240 aaPredicted RBP18.26■□□□□ 0.51
COL9A3-202ENST00000452372 METTL7AQ9H8H3 244 aa18.26■□□□□ 0.51
COL9A3-202ENST00000452372 APCP25054 2843 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 GXYLT2A0PJZ3 443 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 FAM166BA8MTA8 275 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 ICOSLGO75144 302 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 KCNH1O95259 989 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 IL33O95760 270 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 PGRP06401 933 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 ALOX5P09917 674 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 PTGDSP41222 190 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 MRPL19P49406 292 aaKnown RBP18.25■□□□□ 0.51
COL9A3-202ENST00000452372 DGKQP52824 942 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 PSMD4P55036 377 aaKnown RBP18.25■□□□□ 0.51
COL9A3-202ENST00000452372 RBPJQ06330 500 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 TP53BP2Q13625 1128 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 LASP1Q14847 261 aaKnown RBP18.25■□□□□ 0.51
COL9A3-202ENST00000452372 DUSP5Q16690 384 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 BHLHB9Q6PI77 547 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 MIER2Q8N344 545 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 FAM109AQ8N4B1 249 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 RNF138Q8WVD3 245 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 PIK3R3Q92569 461 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 RELTQ969Z4 430 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 TMEM41AQ96HV5 264 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 ACTRT3Q9BYD9 372 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 DEFB127Q9H1M4 99 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 PLSCR2Q9NRY7 297 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 GPATCH2Q9NW75 528 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 GIN1Q9NXP7 522 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 BTNL2Q9UIR0 455 aa18.25■□□□□ 0.51
COL9A3-202ENST00000452372 PRAMEF25A6NGN4 478 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 LRRC3CA6NJW4 275 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 C9JVG2 144 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 ZG16O60844 167 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 SOX30O94993 753 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 CPSF4O95639 269 aaKnown RBP18.24■□□□□ 0.51
COL9A3-202ENST00000452372 IL6P05231 212 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 CYP4B1P13584 511 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 MAGEA5P43359 124 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 LRRC74AQ0VAA2 488 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 FNDC7Q5VTL7 733 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 CDC73Q6P1J9 531 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 OR4A15Q8NGL6 344 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 OR5AK3PQ8NH89 298 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 GOT1L1Q8NHS2 421 aaPredicted RBP18.24■□□□□ 0.51
COL9A3-202ENST00000452372 FBXO30Q8TB52 745 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 ZNF597Q96LX8 424 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 JSRP1Q96MG2 331 aaPredicted RBP18.24■□□□□ 0.51
COL9A3-202ENST00000452372 CCDC115Q96NT0 180 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 OR52E6Q96RD3 313 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 STACQ99469 402 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 SIKE1Q9BRV8 207 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 YIPF4Q9BSR8 244 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 PIGUQ9H490 435 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 DUSP22Q9NRW4 184 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 QPCTLQ9NXS2 382 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 KLRF1Q9NZS2 232 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 FAF1Q9UNN5 650 aaPredicted RBP18.24■□□□□ 0.51
COL9A3-202ENST00000452372 CSMD1Q96PZ7 3565 aa18.24■□□□□ 0.51
COL9A3-202ENST00000452372 FREM3P0C091 2139 aa18.23■□□□□ 0.51
COL9A3-202ENST00000452372 KRT16P08779 473 aa18.23■□□□□ 0.51
COL9A3-202ENST00000452372 RFPL3SP0C7P2 107 aa18.23■□□□□ 0.51
COL9A3-202ENST00000452372 UQCRC2P22695 453 aa18.23■□□□□ 0.51
COL9A3-202ENST00000452372 SOAT1P35610 550 aa18.23■□□□□ 0.51
COL9A3-202ENST00000452372 ZFP36L2P47974 494 aaKnown RBP18.23■□□□□ 0.51
COL9A3-202ENST00000452372 MASP1P48740 699 aa18.23■□□□□ 0.51
COL9A3-202ENST00000452372 GUCY1A3Q02108 690 aa18.23■□□□□ 0.51
COL9A3-202ENST00000452372 SLC10A1Q14973 349 aa18.23■□□□□ 0.51
COL9A3-202ENST00000452372 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.23■□□□□ 0.51
COL9A3-202ENST00000452372 TIGD3Q6B0B8 471 aa18.23■□□□□ 0.51
COL9A3-202ENST00000452372 PAOXQ6QHF9 649 aa18.23■□□□□ 0.51
COL9A3-202ENST00000452372 C6orf120Q7Z4R8 191 aa18.23■□□□□ 0.51
COL9A3-202ENST00000452372 CHERPQ8IWX8 916 aaKnown RBP18.23■□□□□ 0.51
COL9A3-202ENST00000452372 FAM110BQ8TC76 370 aa18.23■□□□□ 0.51
COL9A3-202ENST00000452372 ADAMTS15Q8TE58 950 aa18.23■□□□□ 0.51
COL9A3-202ENST00000452372 JADE3Q92613 823 aa18.23■□□□□ 0.51
COL9A3-202ENST00000452372 RMND5BQ96G75 393 aaPredicted RBP18.23■□□□□ 0.51
COL9A3-202ENST00000452372 OSBPL11Q9BXB4 747 aa18.23■□□□□ 0.51
COL9A3-202ENST00000452372 ZNF703Q9H7S9 590 aaPredicted RBP18.23■□□□□ 0.51
COL9A3-202ENST00000452372 ZNF835Q9Y2P0 537 aa18.23■□□□□ 0.51
COL9A3-202ENST00000452372 NCKAP5O14513 1909 aa18.23■□□□□ 0.51
COL9A3-202ENST00000452372 CDC40O60508 579 aaKnown RBP eCLIP18.22■□□□□ 0.51
COL9A3-202ENST00000452372 KCNK2O95069 426 aa18.22■□□□□ 0.51
COL9A3-202ENST00000452372 IGKV1D-16P01601 117 aa18.22■□□□□ 0.51
COL9A3-202ENST00000452372 IGHG3P01860 377 aa18.22■□□□□ 0.51
COL9A3-202ENST00000452372 ELAVL4P26378 380 aaKnown RBP18.22■□□□□ 0.51
COL9A3-202ENST00000452372 MAN2A2P49641 1150 aa18.22■□□□□ 0.51
COL9A3-202ENST00000452372 POLR2JP52435 117 aaKnown RBP18.22■□□□□ 0.51
COL9A3-202ENST00000452372 STX1BP61266 288 aa18.22■□□□□ 0.51
COL9A3-202ENST00000452372 IRX1P78414 480 aaPredicted RBP18.22■□□□□ 0.51
COL9A3-202ENST00000452372 HSF1Q00613 529 aa18.22■□□□□ 0.51
COL9A3-202ENST00000452372 C1QL3Q5VWW1 255 aa18.22■□□□□ 0.51
COL9A3-202ENST00000452372 FJX1Q86VR8 437 aa18.22■□□□□ 0.51
COL9A3-202ENST00000452372 SPPL2CQ8IUH8 684 aa18.22■□□□□ 0.51
COL9A3-202ENST00000452372 CLEC4FQ8N1N0 589 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms