RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 COL21A1Q96P44 957 aa22.11■■□□□ 1.13
CPSF4-207ENST00000451876 RYDENQ9NUL5 291 aaKnown RBP22.11■■□□□ 1.13
CPSF4-207ENST00000451876 GMEB1Q9Y692 573 aa22.11■■□□□ 1.13
CPSF4-207ENST00000451876 PRAMEF27A3QJZ7 478 aa22.1■■□□□ 1.13
CPSF4-207ENST00000451876 IL33O95760 270 aa22.1■■□□□ 1.13
CPSF4-207ENST00000451876 KRT20P35900 424 aa22.1■■□□□ 1.13
CPSF4-207ENST00000451876 CPA2P48052 419 aa22.1■■□□□ 1.13
CPSF4-207ENST00000451876 MTPNP58546 118 aa22.1■■□□□ 1.13
CPSF4-207ENST00000451876 ZNF169Q14929 603 aaPredicted RBP22.1■■□□□ 1.13
CPSF4-207ENST00000451876 BICRALQ6AI39 1079 aa22.1■■□□□ 1.13
CPSF4-207ENST00000451876 OLIG3Q7RTU3 272 aa22.1■■□□□ 1.13
CPSF4-207ENST00000451876 PCYOX1LQ8NBM8 494 aa22.1■■□□□ 1.13
CPSF4-207ENST00000451876 PAQR8Q8TEZ7 354 aa22.1■■□□□ 1.13
CPSF4-207ENST00000451876 SCMH1Q96GD3 660 aa22.1■■□□□ 1.13
CPSF4-207ENST00000451876 SGCZQ96LD1 299 aa22.1■■□□□ 1.13
CPSF4-207ENST00000451876 NODALQ96S42 347 aa22.1■■□□□ 1.13
CPSF4-207ENST00000451876 FLRT3Q9NZU0 649 aa22.1■■□□□ 1.13
CPSF4-207ENST00000451876 PRRC2CQ9Y520 2896 aaKnown RBP22.1■■□□□ 1.13
CPSF4-207ENST00000451876 NINQ8N4C6 2090 aa22.1■■□□□ 1.13
CPSF4-207ENST00000451876 TRAV17A0A0B4J275 112 aa22.09■■□□□ 1.13
CPSF4-207ENST00000451876 SP1P08047 785 aa22.09■■□□□ 1.13
CPSF4-207ENST00000451876 NUDT7P0C024 238 aa22.09■■□□□ 1.13
CPSF4-207ENST00000451876 PNLIPRP2P54317 469 aa22.09■■□□□ 1.13
CPSF4-207ENST00000451876 PLEKHN1Q494U1 663 aaPredicted RBP22.09■■□□□ 1.13
CPSF4-207ENST00000451876 ZNF766Q5HY98 468 aa22.09■■□□□ 1.13
CPSF4-207ENST00000451876 PRAMEF20Q5VT98 475 aa22.09■■□□□ 1.13
CPSF4-207ENST00000451876 HEPHL1Q6MZM0 1159 aa22.09■■□□□ 1.13
CPSF4-207ENST00000451876 Q8NA96 180 aa22.09■■□□□ 1.13
CPSF4-207ENST00000451876 TMEM125Q96AQ2 219 aa22.09■■□□□ 1.13
CPSF4-207ENST00000451876 SPTA1P02549 2419 aa22.09■■□□□ 1.13
CPSF4-207ENST00000451876 G3V3Y1 287 aa22.09■■□□□ 1.13
CPSF4-207ENST00000451876 CYP4B1P13584 511 aa22.09■■□□□ 1.13
CPSF4-207ENST00000451876 CD46P15529 392 aa22.09■■□□□ 1.13
CPSF4-207ENST00000451876 NUDT2P50583 147 aa22.09■■□□□ 1.13
CPSF4-207ENST00000451876 CBX1P83916 185 aa22.09■■□□□ 1.13
CPSF4-207ENST00000451876 NANOGP8Q6NSW7 305 aa22.09■■□□□ 1.13
CPSF4-207ENST00000451876 GALNTL5Q7Z4T8 443 aa22.09■■□□□ 1.13
CPSF4-207ENST00000451876 PNPLA2Q96AD5 504 aa22.09■■□□□ 1.13
CPSF4-207ENST00000451876 NANOGQ9H9S0 305 aa22.09■■□□□ 1.13
CPSF4-207ENST00000451876 DEPPQ9NTK1 212 aa22.09■■□□□ 1.13
CPSF4-207ENST00000451876 MRTO4Q9UKD2 239 aaKnown RBP22.09■■□□□ 1.13
CPSF4-207ENST00000451876 PCDHGB3Q9Y5G1 929 aa22.09■■□□□ 1.13
CPSF4-207ENST00000451876 A0A0G2JMM0 328 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 A0A1W2PPB8 328 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 A0A1W2PRS3 328 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 KIR3DP1A8MWS1 328 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 NME2P1O60361 137 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 ABCB7O75027 752 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 ICOSLGO75144 302 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 CBX6O95503 412 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 GPX2P18283 190 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 NME2P22392 152 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 GPR85P60893 370 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 FADDQ13158 208 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.08■■□□□ 1.13
CPSF4-207ENST00000451876 RABL3Q5HYI8 236 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 SLC22A10Q63ZE4 541 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 SLC25A25Q6KCM7 469 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 NUP54Q7Z3B4 507 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 C16orf62Q7Z3J2 963 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 TEX19Q8NA77 164 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 CHDHQ8NE62 594 aaPredicted RBP22.08■■□□□ 1.13
CPSF4-207ENST00000451876 SPPL2AQ8TCT8 520 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 C5orf34Q96MH7 638 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 SDF2Q99470 211 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 TIMMDC1Q9NPL8 285 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 EXD2Q9NVH0 621 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 TAGLN3Q9UI15 199 aa22.08■■□□□ 1.13
CPSF4-207ENST00000451876 CNOT11Q9UKZ1 510 aaKnown RBP22.08■■□□□ 1.13
CPSF4-207ENST00000451876 TP53I11O14683 189 aa22.07■■□□□ 1.12
CPSF4-207ENST00000451876 SOX30O94993 753 aa22.07■■□□□ 1.12
CPSF4-207ENST00000451876 ZIC2O95409 532 aaPredicted RBP22.07■■□□□ 1.12
CPSF4-207ENST00000451876 AGR2O95994 175 aa22.07■■□□□ 1.12
CPSF4-207ENST00000451876 NPPAP01160 153 aa22.07■■□□□ 1.12
CPSF4-207ENST00000451876 PPIBP23284 216 aaKnown RBP22.07■■□□□ 1.12
CPSF4-207ENST00000451876 ANXA11P50995 505 aaKnown RBP22.07■■□□□ 1.12
CPSF4-207ENST00000451876 PSMD4P55036 377 aaKnown RBP22.07■■□□□ 1.12
CPSF4-207ENST00000451876 DSTNP60981 165 aa22.07■■□□□ 1.12
CPSF4-207ENST00000451876 KLRB1Q12918 225 aa22.07■■□□□ 1.12
CPSF4-207ENST00000451876 MAPK11Q15759 364 aa22.07■■□□□ 1.12
CPSF4-207ENST00000451876 SYPL1Q16563 259 aa22.07■■□□□ 1.12
CPSF4-207ENST00000451876 ARHGAP11BQ3KRB8 267 aa22.07■■□□□ 1.12
CPSF4-207ENST00000451876 ATAD3BQ5T9A4 648 aa22.07■■□□□ 1.12
CPSF4-207ENST00000451876 LSM14AQ8ND56 463 aaKnown RBP22.07■■□□□ 1.12
CPSF4-207ENST00000451876 SLC39A7Q92504 469 aa22.07■■□□□ 1.12
CPSF4-207ENST00000451876 EFCAB1Q9HAE3 211 aa22.07■■□□□ 1.12
CPSF4-207ENST00000451876 PROK2Q9HC23 129 aa22.07■■□□□ 1.12
CPSF4-207ENST00000451876 SACM1LQ9NTJ5 587 aa22.07■■□□□ 1.12
CPSF4-207ENST00000451876 GID8Q9NWU2 228 aa22.07■■□□□ 1.12
CPSF4-207ENST00000451876 RALYQ9UKM9 306 aaKnown RBP22.07■■□□□ 1.12
CPSF4-207ENST00000451876 EVPLLA8MZ36 301 aa22.06■■□□□ 1.12
CPSF4-207ENST00000451876 FCMRO60667 390 aa22.06■■□□□ 1.12
CPSF4-207ENST00000451876 TNFRSF21O75509 655 aa22.06■■□□□ 1.12
CPSF4-207ENST00000451876 BMP2P12643 396 aa22.06■■□□□ 1.12
CPSF4-207ENST00000451876 TXNL4AP83876 142 aaKnown RBP22.06■■□□□ 1.12
CPSF4-207ENST00000451876 NFATC3Q12968 1075 aa22.06■■□□□ 1.12
CPSF4-207ENST00000451876 EFR3AQ14156 821 aa22.06■■□□□ 1.12
CPSF4-207ENST00000451876 KRT72Q14CN4 511 aa22.06■■□□□ 1.12
CPSF4-207ENST00000451876 TRPM8Q7Z2W7 1104 aa22.06■■□□□ 1.12
CPSF4-207ENST00000451876 FBXW8Q8N3Y1 598 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms