RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 MRPL19P49406 292 aaKnown RBP12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 POU6F2P78424 691 aaPredicted RBP12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 DUSP5Q16690 384 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 TIGD2Q4W5G0 525 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 RNFT1Q5M7Z0 435 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 DESI1Q6ICB0 168 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 TMEM81Q6P7N7 255 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 ANGPTL8Q6UXH0 198 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 ZNF621Q6ZSS3 439 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 MSANTD1Q6ZTZ1 278 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 SIAH3Q8IW03 269 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 GHDCQ8N2G8 530 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 OR9I1Q8NGQ6 314 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 PRR7Q8TB68 274 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 HOXB13Q92826 284 aaPredicted RBP12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 OTUB1Q96FW1 271 aaPredicted RBP12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 SLC35A5Q9BS91 424 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 G6PC3Q9BUM1 346 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 BTBD2Q9BX70 525 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 TMEM120AQ9BXJ8 343 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 PIGUQ9H490 435 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 PROK2Q9HC23 129 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 DUSP22Q9NRW4 184 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 GPATCH2Q9NW75 528 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 CCDC167Q9P0B6 97 aa12.85□□□□□ -0.35
GTF3C3-206ENST00000448539 CCDC154A6NI56 674 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 GNB5O14775 395 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 ICOSLGO75144 302 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 TRIM3O75382 744 aaPredicted RBP12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 GLSO94925 669 aaPredicted RBP12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 AGR2O95994 175 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 ATP6V1C1P21283 382 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 ELAVL4P26378 380 aaKnown RBP12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 GDF1P27539 372 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 ANXA11P50995 505 aaKnown RBP12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 CASP6P55212 293 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 FOXO1Q12778 655 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 SF3A3Q12874 501 aaKnown RBP eCLIP12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 HYAL4Q2M3T9 481 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 EIF2S3LQ2VIR3 472 aaKnown RBP12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 AGKQ53H12 422 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 C6orf10Q5SRN2 563 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 METTL21CQ5VZV1 264 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 FIGNL1Q6PIW4 674 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 CLEC4FQ8N1N0 589 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 FAM109AQ8N4B1 249 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 TMEM251Q8N6I4 163 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 OR52N2Q8NGI0 321 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 GOT1L1Q8NHS2 421 aaPredicted RBP12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 CDS1Q92903 461 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 DTNBP1Q96EV8 351 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 TMEM41AQ96HV5 264 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 OR7D2Q96RA2 312 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 DEFB127Q9H1M4 99 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 LDAHQ9H6V9 325 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 GALNT9Q9HCQ5 603 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 SDHAF3Q9NRP4 125 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 TMEM45AQ9NWC5 275 aa12.84□□□□□ -0.35
GTF3C3-206ENST00000448539 NR5A2O00482 541 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 PDE9AO76083 593 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 KCNK2O95069 426 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 UTS2O95399 124 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 GSNP06396 782 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 HPGDP15428 266 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 LCN1P31025 176 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 EVI2BP34910 448 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 MAGEA5P43359 124 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 RPS26P62854 115 aaKnown RBP12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 SLC10A1Q14973 349 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 TOMM20Q15388 145 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 ATAD3BQ5T9A4 648 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 OR5D16Q8NGK9 328 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 OR1J4Q8NGS1 313 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 VPS33AQ96AX1 596 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 NEURL3Q96EH8 262 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 INPP5KQ9BT40 448 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 TBL1XR1Q9BZK7 514 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 OR51I1Q9H343 314 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 EXO5Q9H790 373 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 MRGBPQ9NV56 204 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 EXD2Q9NVH0 621 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 ABCG2Q9UNQ0 655 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 OSGIN2Q9Y236 505 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 WIF1Q9Y5W5 379 aa12.83□□□□□ -0.36
GTF3C3-206ENST00000448539 C2orf72A6NCS6 295 aa12.82□□□□□ -0.36
GTF3C3-206ENST00000448539 LRRC3CA6NJW4 275 aa12.82□□□□□ -0.36
GTF3C3-206ENST00000448539 SCO2O43819 266 aa12.82□□□□□ -0.36
GTF3C3-206ENST00000448539 TRAPPC6AO75865 159 aa12.82□□□□□ -0.36
GTF3C3-206ENST00000448539 KRT75O95678 551 aa12.82□□□□□ -0.36
GTF3C3-206ENST00000448539 AK1P00568 194 aa12.82□□□□□ -0.36
GTF3C3-206ENST00000448539 IGKV1D-16P01601 117 aa12.82□□□□□ -0.36
GTF3C3-206ENST00000448539 ABOP16442 354 aa12.82□□□□□ -0.36
GTF3C3-206ENST00000448539 CDKN2CP42773 168 aa12.82□□□□□ -0.36
GTF3C3-206ENST00000448539 ZFP36L2P47974 494 aaKnown RBP12.82□□□□□ -0.36
GTF3C3-206ENST00000448539 TRPC1P48995 793 aa12.82□□□□□ -0.36
GTF3C3-206ENST00000448539 KHKP50053 298 aa12.82□□□□□ -0.36
GTF3C3-206ENST00000448539 CASP9P55211 416 aa12.82□□□□□ -0.36
GTF3C3-206ENST00000448539 TXNL4AP83876 142 aaKnown RBP12.82□□□□□ -0.36
GTF3C3-206ENST00000448539 RCAN2Q14206 197 aa12.82□□□□□ -0.36
GTF3C3-206ENST00000448539 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms