RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 A8MVJ9 347 aa13.83□□□□□ -0.19
SF1-211ENST00000448404 CDC42EP2O14613 210 aa13.83□□□□□ -0.19
SF1-211ENST00000448404 ALPPP05187 535 aa13.83□□□□□ -0.19
SF1-211ENST00000448404 SLC35G6P0C7Q6 338 aa13.83□□□□□ -0.19
SF1-211ENST00000448404 RGS8P57771 180 aaPredicted RBP13.83□□□□□ -0.19
SF1-211ENST00000448404 PRR5P85299 388 aa13.83□□□□□ -0.19
SF1-211ENST00000448404 SYT14Q8NB59 555 aa13.83□□□□□ -0.19
SF1-211ENST00000448404 IL21RQ9HBE5 538 aa13.83□□□□□ -0.19
SF1-211ENST00000448404 KCNE5Q9UJ90 142 aa13.83□□□□□ -0.19
SF1-211ENST00000448404 A0A1W2PRQ8 180 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 GNB5O14775 395 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 ACP2P11117 423 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 SERPINB1P30740 379 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 TPTEP56180 551 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 ABATP80404 500 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 SLC35F1Q5T1Q4 408 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 SMARCD3Q6STE5 483 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 FRRS1Q6ZNA5 592 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 LHFPL3Q86UP9 236 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 NLGN4YQ8NFZ3 816 aaPredicted RBP13.83□□□□□ -0.2
SF1-211ENST00000448404 GATAD2BQ8WXI9 593 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 RELTQ969Z4 430 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 NACC2Q96BF6 587 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 SCARF2Q96GP6 870 aaPredicted RBP13.83□□□□□ -0.2
SF1-211ENST00000448404 SMAD5Q99717 465 aaKnown RBP13.83□□□□□ -0.2
SF1-211ENST00000448404 GPR174Q9BXC1 333 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 MED20Q9H944 212 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 PCDHGA3Q9Y5H0 932 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 CSNK1G3Q9Y6M4 447 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 GXYLT2A0PJZ3 443 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 B4DGG1 531 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 PLD2O14939 933 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 SPNP16150 400 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 NT5EP21589 574 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 AZGP1P25311 298 aaKnown RBP13.83□□□□□ -0.2
SF1-211ENST00000448404 CD40LGP29965 261 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 SLC15A1P46059 708 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 NKX2-5P52952 324 aaPredicted RBP13.83□□□□□ -0.2
SF1-211ENST00000448404 MAT1AQ00266 395 aaKnown RBP13.83□□□□□ -0.2
SF1-211ENST00000448404 RGS1Q08116 209 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 MLC1Q15049 377 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 C12orf73Q69YU5 71 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 MFSD12Q6NUT3 480 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 CDC73Q6P1J9 531 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 HSDL2Q6YN16 418 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 TMEM184AQ6ZMB5 413 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 WDR88Q6ZMY6 472 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 TAF8Q7Z7C8 310 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 LRRC25Q8N386 305 aaPredicted RBP13.83□□□□□ -0.2
SF1-211ENST00000448404 OR4F15Q8NGB8 312 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 PRRC1Q96M27 445 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 CDCA3Q99618 268 aaPredicted RBP13.83□□□□□ -0.2
SF1-211ENST00000448404 MROQ9BYG7 248 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 POLR2J2Q9GZM3 115 aaKnown RBP13.83□□□□□ -0.2
SF1-211ENST00000448404 SAP130Q9H0E3 1048 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 ATP13A2Q9NQ11 1180 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 SNTG1Q9NSN8 517 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 CPNE7Q9UBL6 633 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 SLC13A4Q9UKG4 626 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 B3GNT3Q9Y2A9 372 aa13.83□□□□□ -0.2
SF1-211ENST00000448404 DVL2O14641 736 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 RDH16O75452 317 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 MED26O95402 600 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 CCNYL3P0C7X3 344 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 IGFBP4P22692 258 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 TRA2BP62995 288 aaKnown RBP13.82□□□□□ -0.2
SF1-211ENST00000448404 ZMAT1Q5H9K5 638 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 OR4N2Q8NGD1 307 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 OR9A4Q8NGU2 314 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 BBS10Q8TAM1 723 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 VMP1Q96GC9 406 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 ART5Q96L15 291 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 ZNF582Q96NG8 517 aaPredicted RBP13.82□□□□□ -0.2
SF1-211ENST00000448404 DCLRE1CQ96SD1 692 aaKnown RBP13.82□□□□□ -0.2
SF1-211ENST00000448404 MCHR1Q99705 422 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 TM9SF2Q99805 663 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 ERVK13-1Q9NX77 482 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 DAPP1Q9UN19 280 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 CLCA2Q9UQC9 943 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 SLC35F4A4IF30 521 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 FAM47E-STBD1D6RA91 191 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 SEMA4FO95754 770 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 IGHV4-34P06331 123 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 CPMP14384 443 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 RPS19P39019 145 aaKnown RBP13.82□□□□□ -0.2
SF1-211ENST00000448404 TNFRSF17Q02223 184 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 SPHARQ15513 63 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 PLEKHM3Q6ZWE6 761 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 SLC30A8Q8IWU4 369 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 AVL9Q8NBF6 648 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 OR56A1Q8NGH5 318 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 OR52I1Q8NGK6 324 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 OR4Q3Q8NH05 313 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 PFN4Q8NHR9 129 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 TM9SF4Q92544 642 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 GAL3ST3Q96A11 431 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 FAM131CQ96AQ9 280 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 TOE1Q96GM8 510 aaKnown RBP13.82□□□□□ -0.2
SF1-211ENST00000448404 BARHL1Q9BZE3 327 aa13.82□□□□□ -0.2
SF1-211ENST00000448404 C20orf141Q9NUB4 165 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms