RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 PIGMQ9H3S5 423 aa25.58■■□□□ 1.69
CBX4-202ENST00000448310 PACSIN3Q9UKS6 424 aa25.58■■□□□ 1.69
CBX4-202ENST00000448310 POLR3HQ9Y535 204 aaPredicted RBP25.58■■□□□ 1.69
CBX4-202ENST00000448310 A0A1W2PNV4 684 aa25.57■■□□□ 1.68
CBX4-202ENST00000448310 SERTM1A2A2V5 107 aa25.57■■□□□ 1.68
CBX4-202ENST00000448310 A8MXE2 369 aa25.57■■□□□ 1.68
CBX4-202ENST00000448310 FAM153BP0C7A2 387 aa25.57■■□□□ 1.68
CBX4-202ENST00000448310 DSCR4P56555 118 aaPredicted RBP25.57■■□□□ 1.68
CBX4-202ENST00000448310 MRPS22P82650 360 aaKnown RBP25.57■■□□□ 1.68
CBX4-202ENST00000448310 SLC29A2Q14542 456 aa25.57■■□□□ 1.68
CBX4-202ENST00000448310 FAM153CQ494X1 144 aa25.57■■□□□ 1.68
CBX4-202ENST00000448310 FADS6Q8N9I5 356 aa25.57■■□□□ 1.68
CBX4-202ENST00000448310 OR2M3Q8NG83 312 aa25.57■■□□□ 1.68
CBX4-202ENST00000448310 ACMSDQ8TDX5 336 aa25.57■■□□□ 1.68
CBX4-202ENST00000448310 RTN4RQ9BZR6 473 aa25.57■■□□□ 1.68
CBX4-202ENST00000448310 MIEF1Q9NQG6 463 aa25.57■■□□□ 1.68
CBX4-202ENST00000448310 DLL4Q9NR61 685 aa25.57■■□□□ 1.68
CBX4-202ENST00000448310 MED11Q9P086 117 aa25.57■■□□□ 1.68
CBX4-202ENST00000448310 PSMC3IPQ9P2W1 217 aaPredicted RBP25.57■■□□□ 1.68
CBX4-202ENST00000448310 GSTA1P08263 222 aa25.56■■□□□ 1.68
CBX4-202ENST00000448310 GSTM5P46439 218 aa25.56■■□□□ 1.68
CBX4-202ENST00000448310 DIO3P55073 304 aa25.56■■□□□ 1.68
CBX4-202ENST00000448310 IMPG1Q17R60 797 aa25.56■■□□□ 1.68
CBX4-202ENST00000448310 FAM71E1Q6IPT2 247 aa25.56■■□□□ 1.68
CBX4-202ENST00000448310 WFDC11Q8NEX6 87 aa25.56■■□□□ 1.68
CBX4-202ENST00000448310 OR5M1Q8NGP8 315 aa25.56■■□□□ 1.68
CBX4-202ENST00000448310 GLIPR2Q9H4G4 154 aa25.56■■□□□ 1.68
CBX4-202ENST00000448310 A0A087WV62 115 aa25.55■■□□□ 1.68
CBX4-202ENST00000448310 A0A1W2PPM1 405 aa25.55■■□□□ 1.68
CBX4-202ENST00000448310 G3V2L1 256 aa25.55■■□□□ 1.68
CBX4-202ENST00000448310 H0YC42 278 aa25.55■■□□□ 1.68
CBX4-202ENST00000448310 UPK1AO00322 258 aa25.55■■□□□ 1.68
CBX4-202ENST00000448310 FADS1O60427 444 aa25.55■■□□□ 1.68
CBX4-202ENST00000448310 SMNDC1O75940 238 aaKnown RBP eCLIP25.55■■□□□ 1.681e-7■■■□□ 15.1
CBX4-202ENST00000448310 GOSR1O95249 250 aa25.55■■□□□ 1.68
CBX4-202ENST00000448310 HK1P19367 917 aa25.55■■□□□ 1.68
CBX4-202ENST00000448310 TPD52P55327 224 aaPredicted RBP25.55■■□□□ 1.68
CBX4-202ENST00000448310 BCL2A1Q16548 175 aa25.55■■□□□ 1.68
CBX4-202ENST00000448310 KRTAP21-3Q3LHN1 58 aa25.55■■□□□ 1.68
CBX4-202ENST00000448310 RAET1LQ5VY80 246 aa25.55■■□□□ 1.68
CBX4-202ENST00000448310 VWA1Q6PCB0 445 aa25.55■■□□□ 1.68
CBX4-202ENST00000448310 CHMP1BQ7LBR1 199 aa25.55■■□□□ 1.68
CBX4-202ENST00000448310 IFT20Q8IY31 132 aa25.55■■□□□ 1.68
CBX4-202ENST00000448310 CNEP1R1Q8N9A8 125 aa25.55■■□□□ 1.68
CBX4-202ENST00000448310 PUM2Q8TB72 1066 aaKnown RBP eCLIP25.55■■□□□ 1.68
CBX4-202ENST00000448310 SHCBP1LQ9BZQ2 653 aa25.55■■□□□ 1.68
CBX4-202ENST00000448310 MYNNQ9NPC7 610 aa25.55■■□□□ 1.68
CBX4-202ENST00000448310 DCDC2Q9UHG0 476 aa25.55■■□□□ 1.68
CBX4-202ENST00000448310 C19orf53Q9UNZ5 99 aaPredicted RBP25.55■■□□□ 1.68
CBX4-202ENST00000448310 SLC22A20A6NK97 555 aa25.54■■□□□ 1.68
CBX4-202ENST00000448310 MYL2P10916 166 aa25.54■■□□□ 1.68
CBX4-202ENST00000448310 PEPDP12955 493 aa25.54■■□□□ 1.68
CBX4-202ENST00000448310 HOXB4P17483 251 aaPredicted RBP25.54■■□□□ 1.68
CBX4-202ENST00000448310 RFX3P48380 749 aa25.54■■□□□ 1.68
CBX4-202ENST00000448310 CLDN15P56746 228 aa25.54■■□□□ 1.68
CBX4-202ENST00000448310 FAM27E3Q08E93 113 aa25.54■■□□□ 1.68
CBX4-202ENST00000448310 CYP27C1Q4G0S4 372 aa25.54■■□□□ 1.68
CBX4-202ENST00000448310 ZYG11AQ6WRX3 759 aa25.54■■□□□ 1.68
CBX4-202ENST00000448310 FIG4Q92562 907 aa25.54■■□□□ 1.68
CBX4-202ENST00000448310 STARD4Q96DR4 205 aa25.54■■□□□ 1.68
CBX4-202ENST00000448310 TNFRSF12AQ9NP84 129 aa25.54■■□□□ 1.68
CBX4-202ENST00000448310 DDX18Q9NVP1 670 aaKnown RBP25.54■■□□□ 1.68
CBX4-202ENST00000448310 SEC14L5O43304 696 aa25.53■■□□□ 1.68
CBX4-202ENST00000448310 NTSP30990 170 aa25.53■■□□□ 1.68
CBX4-202ENST00000448310 SUCLG1P53597 346 aaKnown RBP25.53■■□□□ 1.68
CBX4-202ENST00000448310 DECR1Q16698 335 aa25.53■■□□□ 1.68
CBX4-202ENST00000448310 OR2L13Q8N349 312 aa25.53■■□□□ 1.68
CBX4-202ENST00000448310 MEIOBQ8N635 442 aa25.53■■□□□ 1.68
CBX4-202ENST00000448310 AMDHD1Q96NU7 426 aa25.53■■□□□ 1.68
CBX4-202ENST00000448310 TXLNGYQ9BZA5 131 aa25.53■■□□□ 1.68
CBX4-202ENST00000448310 GRID1Q9ULK0 1009 aa25.53■■□□□ 1.68
CBX4-202ENST00000448310 ZNF337Q9Y3M9 751 aa25.53■■□□□ 1.68
CBX4-202ENST00000448310 TESMINQ9Y4I5 508 aa25.53■■□□□ 1.68
CBX4-202ENST00000448310 MSTNO14793 375 aa25.52■■□□□ 1.68
CBX4-202ENST00000448310 CASKO14936 926 aa25.52■■□□□ 1.68
CBX4-202ENST00000448310 CRCPO75575 148 aa25.52■■□□□ 1.68
CBX4-202ENST00000448310 PSMG1O95456 288 aa25.52■■□□□ 1.68
CBX4-202ENST00000448310 CD53P19397 219 aa25.52■■□□□ 1.68
CBX4-202ENST00000448310 EEF1A1P68104 462 aaKnown RBP25.52■■□□□ 1.68
CBX4-202ENST00000448310 SIRPAP78324 504 aa25.52■■□□□ 1.68
CBX4-202ENST00000448310 EEF1A1P5Q5VTE0 462 aa25.52■■□□□ 1.68
CBX4-202ENST00000448310 BTLAQ7Z6A9 289 aa25.52■■□□□ 1.68
CBX4-202ENST00000448310 MARCH3Q86UD3 253 aa25.52■■□□□ 1.68
CBX4-202ENST00000448310 GSPT2Q8IYD1 628 aaKnown RBP25.52■■□□□ 1.68
CBX4-202ENST00000448310 SMPDL3BQ92485 455 aa25.52■■□□□ 1.68
CBX4-202ENST00000448310 ELP4Q96EB1 424 aa25.52■■□□□ 1.68
CBX4-202ENST00000448310 CCDC126Q96EE4 140 aa25.52■■□□□ 1.68
CBX4-202ENST00000448310 RHOXF2Q9BQY4 288 aa25.52■■□□□ 1.68
CBX4-202ENST00000448310 Q9N2J8 555 aa25.52■■□□□ 1.68
CBX4-202ENST00000448310 TAS2R7Q9NYW3 318 aa25.52■■□□□ 1.68
CBX4-202ENST00000448310 NDRG3Q9UGV2 375 aa25.52■■□□□ 1.68
CBX4-202ENST00000448310 ABCG2Q9UNQ0 655 aa25.52■■□□□ 1.68
CBX4-202ENST00000448310 H3BML4 177 aa25.51■■□□□ 1.67
CBX4-202ENST00000448310 GLRA3O75311 464 aa25.51■■□□□ 1.67
CBX4-202ENST00000448310 SLITRK5O94991 958 aa25.51■■□□□ 1.67
CBX4-202ENST00000448310 PROCP04070 461 aa25.51■■□□□ 1.67
CBX4-202ENST00000448310 OR2A2Q6IF42 318 aa25.51■■□□□ 1.67
CBX4-202ENST00000448310 NOXRED1Q6NXP6 359 aa25.51■■□□□ 1.67
CBX4-202ENST00000448310 FRMD7Q6ZUT3 714 aa25.51■■□□□ 1.67
CBX4-202ENST00000448310 TRIM46Q7Z4K8 759 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms