RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 TIMMDC1Q9NPL8 285 aa12.91□□□□□ -0.34
CTSS-202ENST00000448301 ARL8BQ9NVJ2 186 aa12.91□□□□□ -0.34
CTSS-202ENST00000448301 THUMPD1Q9NXG2 353 aaKnown RBP12.91□□□□□ -0.34
CTSS-202ENST00000448301 TAGLN3Q9UI15 199 aa12.91□□□□□ -0.34
CTSS-202ENST00000448301 KCNE3Q9Y6H6 103 aa12.91□□□□□ -0.34
CTSS-202ENST00000448301 AIM2O14862 343 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 UGT2B11O75310 529 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 SLC25A12O75746 678 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 IGKV1D-16P01601 117 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 BMP2P12643 396 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 ETFAP13804 333 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 CD46P15529 392 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 GPX2P18283 190 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 LCN1P31025 176 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 CRATP43155 626 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 DSTNP60981 165 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 RPP38P78345 283 aaKnown RBP12.9□□□□□ -0.34
CTSS-202ENST00000448301 CAPRIN1Q14444 709 aaKnown RBP12.9□□□□□ -0.34
CTSS-202ENST00000448301 ZNF169Q14929 603 aaPredicted RBP12.9□□□□□ -0.34
CTSS-202ENST00000448301 ARHGAP11BQ3KRB8 267 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 ATAD3BQ5T9A4 648 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 TMEM81Q6P7N7 255 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 FIGNL1Q6PIW4 674 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 TRPM8Q7Z2W7 1104 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 MDGA2Q7Z553 956 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 PSD4Q8NDX1 1056 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 FAM13CQ8NE31 585 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 OR8J3Q8NGG0 315 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 SPPL2AQ8TCT8 520 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 RAB8BQ92930 207 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 TMEM125Q96AQ2 219 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 C5orf34Q96MH7 638 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 ADOQ96SZ5 270 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 SH3GL1Q99961 368 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 SLC39A3Q9BRY0 314 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 B3GNT3Q9Y2A9 372 aa12.9□□□□□ -0.34
CTSS-202ENST00000448301 CHCHD2Q9Y6H1 151 aaPredicted RBP12.9□□□□□ -0.34
CTSS-202ENST00000448301 SPENQ96T58 3664 aaKnown RBP12.9□□□□□ -0.34
CTSS-202ENST00000448301 BOD1L1Q8NFC6 3051 aa12.9□□□□□ -0.35
CTSS-202ENST00000448301 NME2P1O60361 137 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 SP1P08047 785 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 GUSBP08236 651 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 NME2P22392 152 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 NUDT2P50583 147 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 MTPNP58546 118 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 CBX1P83916 185 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 FUT5Q11128 374 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 ZNF766Q5HY98 468 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 SLC6A19Q695T7 634 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 SLC25A25Q6KCM7 469 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 NANOGP8Q6NSW7 305 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 C16orf62Q7Z3J2 963 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 FBXW8Q8N3Y1 598 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 TMEM178AQ8NBL3 297 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 OR5M3Q8NGP4 307 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 XAGE5Q8WWM1 108 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 PNPLA2Q96AD5 504 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 TMCO6Q96DC7 493 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 SDF2Q99470 211 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 OCEL1Q9H607 264 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 NANOGQ9H9S0 305 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 SACM1LQ9NTJ5 587 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 CNIH4Q9P003 139 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 P2RX2Q9UBL9 471 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 CNOT11Q9UKZ1 510 aaKnown RBP12.89□□□□□ -0.35
CTSS-202ENST00000448301 LIPT1Q9Y234 373 aa12.89□□□□□ -0.35
CTSS-202ENST00000448301 C15orf38-AP3S2A0A0A6YYH1 394 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 PRAMEF27A3QJZ7 478 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 ANKRD33BA6NCL7 494 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 HS6ST1O60243 411 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 TNFRSF21O75509 655 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 P04436 131 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 CCL3P10147 92 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 CYP4B1P13584 511 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 RFX3P48380 749 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 KLRB1Q12918 225 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 ART3Q13508 389 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 SELPLGQ14242 412 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 NADK2Q4G0N4 442 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 TBCELQ5QJ74 424 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 CCNJQ5T5M9 372 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 AP1ARQ63HQ0 302 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 SLC22A10Q63ZE4 541 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 DESI1Q6ICB0 168 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 C8orf82Q6P1X6 216 aaPredicted RBP12.88□□□□□ -0.35
CTSS-202ENST00000448301 ARPINQ7Z6K5 226 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 C10orf111Q8N326 155 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 RNF138Q8WVD3 245 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 NODALQ96S42 347 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 HOPXQ9BPY8 73 aaPredicted RBP12.88□□□□□ -0.35
CTSS-202ENST00000448301 GPATCH1Q9BRR8 931 aaKnown RBP12.88□□□□□ -0.35
CTSS-202ENST00000448301 THUMPD3Q9BV44 507 aaKnown RBP12.88□□□□□ -0.35
CTSS-202ENST00000448301 MFRPQ9BY79 579 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 HES7Q9BYE0 225 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 TRIM8Q9BZR9 551 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 ZNF350Q9GZX5 532 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 KAT8Q9H7Z6 458 aaKnown RBP12.88□□□□□ -0.35
CTSS-202ENST00000448301 POLE3Q9NRF9 147 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 FBXO34Q9NWN3 711 aa12.88□□□□□ -0.35
CTSS-202ENST00000448301 ABCG2Q9UNQ0 655 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms