RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 A0A1W2PPH5 198 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 M0R143 59 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 RPS17P08708 135 aaKnown RBP8.53□□□□□ -1.04
NIPBL-202ENST00000448238 CBLP22681 906 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 RFTN1Q14699 578 aaPredicted RBP8.53□□□□□ -1.04
NIPBL-202ENST00000448238 CNN3Q15417 329 aaKnown RBP8.53□□□□□ -1.04
NIPBL-202ENST00000448238 HLFQ16534 295 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 MPEG1Q2M385 716 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 GPR33Q49SQ1 333 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 C11orf42Q8N5U0 333 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 OR5M8Q8NGP6 311 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 H3BSH0 61 aa8.52□□□□□ -1.04
NIPBL-202ENST00000448238 MRPS14O60783 128 aaKnown RBP8.52□□□□□ -1.04
NIPBL-202ENST00000448238 OR4F21O95013 312 aa8.52□□□□□ -1.04
NIPBL-202ENST00000448238 PTHP01270 115 aa8.52□□□□□ -1.04
NIPBL-202ENST00000448238 KCNA6P17658 529 aa8.52□□□□□ -1.04
NIPBL-202ENST00000448238 GCH1P30793 250 aa8.52□□□□□ -1.04
NIPBL-202ENST00000448238 SUB1P53999 127 aaKnown RBP eCLIP8.52□□□□□ -1.04
NIPBL-202ENST00000448238 TAS2R19P59542 299 aa8.52□□□□□ -1.04
NIPBL-202ENST00000448238 PPATQ06203 517 aa8.52□□□□□ -1.04
NIPBL-202ENST00000448238 CYBRD1Q53TN4 286 aa8.52□□□□□ -1.04
NIPBL-202ENST00000448238 PHF19Q5T6S3 580 aa8.52□□□□□ -1.04
NIPBL-202ENST00000448238 Q6ZRG5 221 aa8.52□□□□□ -1.04
NIPBL-202ENST00000448238 PRSS58Q8IYP2 241 aa8.52□□□□□ -1.04
NIPBL-202ENST00000448238 ZNF561Q8N587 486 aa8.52□□□□□ -1.04
NIPBL-202ENST00000448238 LIPHQ8WWY8 451 aa8.52□□□□□ -1.04
NIPBL-202ENST00000448238 PRRC1Q96M27 445 aa8.52□□□□□ -1.04
NIPBL-202ENST00000448238 MGLLQ99685 303 aa8.52□□□□□ -1.04
NIPBL-202ENST00000448238 MAGEH1Q9H213 219 aa8.52□□□□□ -1.04
NIPBL-202ENST00000448238 EIF2B3Q9NR50 452 aaKnown RBP8.52□□□□□ -1.04
NIPBL-202ENST00000448238 SLC2A9Q9NRM0 540 aa8.52□□□□□ -1.04
NIPBL-202ENST00000448238 LYRM1O43325 122 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 HLA-AP01891 365 aaKnown RBP8.52□□□□□ -1.05
NIPBL-202ENST00000448238 HEXAP06865 529 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 GGT1P19440 569 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 BRCC3P46736 316 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 SNRPD2P62316 118 aaKnown RBP8.52□□□□□ -1.05
NIPBL-202ENST00000448238 MRPS5P82675 430 aaKnown RBP8.52□□□□□ -1.05
NIPBL-202ENST00000448238 CD300LGQ6UXG3 332 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 SLC38A6Q8IZM9 456 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 FIBCD1Q8N539 461 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 UBALD1Q8TB05 177 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 MED18Q9BUE0 208 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 GALNT9Q9HCQ5 603 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 CACFD1Q9UGQ2 172 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 RNF150Q9ULK6 438 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 INSIG1O15503 277 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 SYT7O43581 403 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 AK1P00568 194 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 FUT4P22083 530 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 PYCR1P32322 319 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 TAP2Q03519 686 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 FAM214AQ32MH5 1076 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 GGNBP1Q5YKI7 109 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 LCN10Q6JVE6 187 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 FSTL4Q6MZW2 842 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 OR51L1Q8NGJ5 315 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 NGBQ9NPG2 151 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 SMOXQ9NWM0 555 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 BABAM2Q9NXR7 383 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 OSGIN2Q9Y236 505 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 NOTCH3Q9UM47 2321 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 LOC102724200A0A096LPH7 203 aaPredicted RBP8.52□□□□□ -1.05
NIPBL-202ENST00000448238 OR6C68A6NDL8 312 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 PSMB2P49721 201 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 DLX2Q07687 328 aaPredicted RBP8.52□□□□□ -1.05
NIPBL-202ENST00000448238 GBX1Q14549 363 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 SUSD4Q5VX71 490 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 NPNTQ6UXI9 565 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 SERPINA9Q86WD7 417 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 LRRC52Q8N7C0 313 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 CANT1Q8WVQ1 401 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 NKX3-1Q99801 234 aaPredicted RBP8.52□□□□□ -1.05
NIPBL-202ENST00000448238 MACROD1Q9BQ69 325 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.52□□□□□ -1.055e-7■■■■□ 25.6
NIPBL-202ENST00000448238 KCNQ5Q9NR82 932 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.52□□□□□ -1.05
NIPBL-202ENST00000448238 A8MUI8 341 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 UQCRC2P22695 453 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 BMI1P35226 326 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 CASP3P42574 277 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 PDGFRLQ15198 375 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 TIGITQ495A1 244 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 FFAR4Q5NUL3 377 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 OR5L2Q8NGL0 311 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 OR5AK2Q8NH90 309 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 MRPL38Q96DV4 380 aaKnown RBP8.52□□□□□ -1.05
NIPBL-202ENST00000448238 OR1F2PQ96R84 312 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 WRAP53Q9BUR4 548 aaKnown RBP8.52□□□□□ -1.05
NIPBL-202ENST00000448238 ZDHHC5Q9C0B5 715 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 C14orf119Q9NWQ9 140 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 VAPAQ9P0L0 249 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 SIAH2O43255 324 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 ERI3O43414 337 aaKnown RBP8.52□□□□□ -1.05
NIPBL-202ENST00000448238 ITM2AO43736 263 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 MTX2O75431 263 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 C8AP07357 584 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 SHMT1P34896 483 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 APLNRP35414 380 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 DMWDQ09019 674 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms