RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 SLC26A7Q8TE54 656 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 TMBIM1Q969X1 311 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 FER1L6-AS2Q96M78 137 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 POLE3Q9NRF9 147 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 FBXO34Q9NWN3 711 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 MYOTQ9UBF9 498 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 MKLN1Q9UL63 735 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 TMEM200CA6NKL6 621 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 NKX2-8O15522 239 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 ETS2P15036 469 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 KRT20P35900 424 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 PSMD4P55036 377 aaKnown RBP18.04■□□□□ 0.48
SGCE-207ENST00000447873 Q0VFX4 171 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 GPR68Q15743 365 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 CRB2Q5IJ48 1285 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 DCAF10Q5QP82 559 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 ATP1A1-AS1Q5TC04 95 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 TCTN3Q6NUS6 607 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 FRRS1Q6ZNA5 592 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 C16orf47Q6ZP98 133 aaPredicted RBP18.04■□□□□ 0.48
SGCE-207ENST00000447873 TAGAPQ8N103 731 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 EID3Q8N140 333 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 SNIP1Q8TAD8 396 aaKnown RBP18.04■□□□□ 0.48
SGCE-207ENST00000447873 FAM110BQ8TC76 370 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 THAP4Q8WY91 577 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 COL21A1Q96P44 957 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 LMF1Q96S06 567 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 DPH1Q9BZG8 443 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 MTHFD2LQ9H903 347 aaPredicted RBP18.04■□□□□ 0.48
SGCE-207ENST00000447873 DCAF13Q9NV06 445 aaKnown RBP18.04■□□□□ 0.48
SGCE-207ENST00000447873 RPS6KA6Q9UK32 745 aa18.04■□□□□ 0.48
SGCE-207ENST00000447873 ZNF891A8MT65 544 aaPredicted RBP18.03■□□□□ 0.48
SGCE-207ENST00000447873 ZIC2O95409 532 aaPredicted RBP18.03■□□□□ 0.48
SGCE-207ENST00000447873 ZNF682O95780 498 aa18.03■□□□□ 0.48
SGCE-207ENST00000447873 IGKV1D-16P01601 117 aa18.03■□□□□ 0.48
SGCE-207ENST00000447873 OPN1SWP03999 348 aa18.03■□□□□ 0.48
SGCE-207ENST00000447873 PRKAR1AP10644 381 aa18.03■□□□□ 0.48
SGCE-207ENST00000447873 ITGAMP11215 1152 aa18.03■□□□□ 0.48
SGCE-207ENST00000447873 PLCXD2Q0VAA5 305 aa18.03■□□□□ 0.48
SGCE-207ENST00000447873 C10orf67Q8IYJ2 551 aa18.03■□□□□ 0.48
SGCE-207ENST00000447873 PRR22Q8IZ63 422 aa18.03■□□□□ 0.48
SGCE-207ENST00000447873 SLC34A3Q8N130 599 aa18.03■□□□□ 0.48
SGCE-207ENST00000447873 TAMM41Q96BW9 452 aa18.03■□□□□ 0.48
SGCE-207ENST00000447873 EFHD2Q96C19 240 aaPredicted RBP18.03■□□□□ 0.48
SGCE-207ENST00000447873 RSRC1Q96IZ7 334 aaKnown RBP18.03■□□□□ 0.48
SGCE-207ENST00000447873 SPATA5L1Q9BVQ7 753 aa18.03■□□□□ 0.48
SGCE-207ENST00000447873 CCDC86Q9H6F5 360 aaKnown RBP18.03■□□□□ 0.48
SGCE-207ENST00000447873 ATP13A2Q9NQ11 1180 aa18.03■□□□□ 0.48
SGCE-207ENST00000447873 ADPRHL2Q9NX46 363 aa18.03■□□□□ 0.48
SGCE-207ENST00000447873 SAMD4AQ9UPU9 718 aaKnown RBP18.03■□□□□ 0.48
SGCE-207ENST00000447873 GPC6Q9Y625 555 aaPredicted RBP18.03■□□□□ 0.48
SGCE-207ENST00000447873 DSPPQ9NZW4 1301 aa18.03■□□□□ 0.48
SGCE-207ENST00000447873 REM1O75628 298 aa18.02■□□□□ 0.48
SGCE-207ENST00000447873 IL33O95760 270 aa18.02■□□□□ 0.48
SGCE-207ENST00000447873 GUSBP08236 651 aa18.02■□□□□ 0.48
SGCE-207ENST00000447873 WT1P19544 449 aaPredicted RBP18.02■□□□□ 0.48
SGCE-207ENST00000447873 ABCD3P28288 659 aa18.02■□□□□ 0.48
SGCE-207ENST00000447873 IL12BP29460 328 aa18.02■□□□□ 0.48
SGCE-207ENST00000447873 HOXD11P31277 338 aaPredicted RBP18.02■□□□□ 0.48
SGCE-207ENST00000447873 CRYBA2P53672 197 aa18.02■□□□□ 0.48
SGCE-207ENST00000447873 RHDQ02161 417 aa18.02■□□□□ 0.48
SGCE-207ENST00000447873 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.02■□□□□ 0.48
SGCE-207ENST00000447873 FLYWCH1Q4VC44 716 aa18.02■□□□□ 0.48
SGCE-207ENST00000447873 CYBRD1Q53TN4 286 aa18.02■□□□□ 0.48
SGCE-207ENST00000447873 ARMC8Q8IUR7 673 aa18.02■□□□□ 0.48
SGCE-207ENST00000447873 ZNF619Q8N2I2 560 aa18.02■□□□□ 0.48
SGCE-207ENST00000447873 OMA1Q96E52 524 aa18.02■□□□□ 0.48
SGCE-207ENST00000447873 CCNL2Q96S94 520 aaPredicted RBP18.02■□□□□ 0.48
SGCE-207ENST00000447873 SAP130Q9H0E3 1048 aa18.02■□□□□ 0.48
SGCE-207ENST00000447873 QRSL1Q9H0R6 528 aaKnown RBP18.02■□□□□ 0.48
SGCE-207ENST00000447873 CACYBPQ9HB71 228 aaKnown RBP18.02■□□□□ 0.48
SGCE-207ENST00000447873 SEC14L3Q9UDX4 400 aa18.02■□□□□ 0.48
SGCE-207ENST00000447873 V9GYQ6 96 aa18.02■□□□□ 0.48
SGCE-207ENST00000447873 TCRBV5S2A0A599 114 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 SUV39H1O43463 412 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 KIAA0513O60268 411 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 OR2J2O76002 312 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 ALPPP05187 535 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 RRADP55042 308 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 CHAF1BQ13112 559 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 AIMP2Q13155 320 aaKnown RBP18.01■□□□□ 0.47
SGCE-207ENST00000447873 ELOAQ14241 798 aaKnown RBP18.01■□□□□ 0.47
SGCE-207ENST00000447873 CRTC2Q53ET0 693 aaPredicted RBP18.01■□□□□ 0.47
SGCE-207ENST00000447873 CBLL1Q75N03 491 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 HMGN2P46Q86SG4 172 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 ZAR1Q86SH2 424 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 RPS19BP1Q86WX3 136 aaKnown RBP18.01■□□□□ 0.47
SGCE-207ENST00000447873 PEX5LQ8IYB4 626 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 SLC5A8Q8N695 610 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 CLEC1AQ8NC01 280 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 SLC22A8Q8TCC7 542 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 SPPL2AQ8TCT8 520 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 RASSF5Q8WWW0 418 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 LZICQ8WZA0 190 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 DIO2Q92813 273 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 PMM1Q92871 262 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 STMN2Q93045 179 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 POP5Q969H6 163 aaKnown RBP18.01■□□□□ 0.47
SGCE-207ENST00000447873 ZG16BQ96DA0 208 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 THOC3Q96J01 351 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms