RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 FBXW10Q5XX13 1052 aa11.39□□□□□ -0.59
SSR4-205ENST00000447375 ARHGAP11AQ6P4F7 1023 aa11.39□□□□□ -0.59
SSR4-205ENST00000447375 TMEM64Q6YI46 380 aa11.39□□□□□ -0.59
SSR4-205ENST00000447375 ZNF551Q7Z340 670 aaPredicted RBP11.39□□□□□ -0.59
SSR4-205ENST00000447375 LIX1LQ8IVB5 337 aa11.39□□□□□ -0.59
SSR4-205ENST00000447375 OR2L13Q8N349 312 aa11.39□□□□□ -0.59
SSR4-205ENST00000447375 KRTCAP2Q8N6L1 136 aa11.39□□□□□ -0.59
SSR4-205ENST00000447375 NATD1Q8N6N6 113 aa11.39□□□□□ -0.59
SSR4-205ENST00000447375 ZFP62Q8NB50 900 aaPredicted RBP11.39□□□□□ -0.59
SSR4-205ENST00000447375 OR7A2PQ8NGA2 310 aa11.39□□□□□ -0.59
SSR4-205ENST00000447375 PAQR8Q8TEZ7 354 aa11.39□□□□□ -0.59
SSR4-205ENST00000447375 HSPBAP1Q96EW2 488 aa11.39□□□□□ -0.59
SSR4-205ENST00000447375 ZBED6CLQ96FA7 236 aaPredicted RBP11.39□□□□□ -0.59
SSR4-205ENST00000447375 LCORQ96JN0 433 aaPredicted RBP11.39□□□□□ -0.59
SSR4-205ENST00000447375 VSTM2LQ96N03 204 aa11.39□□□□□ -0.59
SSR4-205ENST00000447375 BTBD9Q96Q07 612 aa11.39□□□□□ -0.59
SSR4-205ENST00000447375 ITPAQ9BY32 194 aa11.39□□□□□ -0.59
SSR4-205ENST00000447375 SACM1LQ9NTJ5 587 aa11.39□□□□□ -0.59
SSR4-205ENST00000447375 DEPPQ9NTK1 212 aa11.39□□□□□ -0.59
SSR4-205ENST00000447375 BEX4Q9NWD9 120 aaPredicted RBP11.39□□□□□ -0.59
SSR4-205ENST00000447375 TAS2R9Q9NYW1 312 aa11.39□□□□□ -0.59
SSR4-205ENST00000447375 CNIH4Q9P003 139 aa11.39□□□□□ -0.59
SSR4-205ENST00000447375 NTMQ9P121 344 aa11.39□□□□□ -0.59
SSR4-205ENST00000447375 CBLCQ9ULV8 474 aa11.39□□□□□ -0.59
SSR4-205ENST00000447375 A0A0G2JNJ9 132 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 ANKRD33BA6NCL7 494 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 FRG2CA6NGY1 282 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 SDHDO14521 159 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 ZNF195O14628 629 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 SMAD7O15105 426 aaKnown RBP11.38□□□□□ -0.59
SSR4-205ENST00000447375 ARHGEF9O43307 516 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 PSMG1O95456 288 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 CT45A8P0DMV1 189 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 CT45A9P0DMV2 189 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 CCL3P10147 92 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 LAMP1P11279 417 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 LBPP18428 481 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 ABCD3P28288 659 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 RFC3P40938 356 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 MC3RP41968 323 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 DIO3P55073 304 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 MANFP55145 182 aaKnown RBP11.38□□□□□ -0.59
SSR4-205ENST00000447375 GPR85P60893 370 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 SLC25A35Q3KQZ1 300 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 FLYWCH1Q4VC44 716 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 CT45A2Q5DJT8 189 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 CMPK2Q5EBM0 449 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 CPTPQ5TA50 214 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 OGFOD2Q6N063 350 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 TMEM107Q6UX40 140 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 OR2M7Q8NG81 312 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 OR10G3Q8NGC4 313 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 ZFP28Q8NHY6 868 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 PIWIL2Q8TC59 973 aaKnown RBP11.38□□□□□ -0.59
SSR4-205ENST00000447375 FAM222BQ8WU58 562 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 C7orf26Q96N11 449 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 SECISBP2Q96T21 854 aaKnown RBP11.38□□□□□ -0.59
SSR4-205ENST00000447375 PRPF18Q99633 342 aaKnown RBP11.38□□□□□ -0.59
SSR4-205ENST00000447375 FAM173AQ9BQD7 235 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 ACBD3Q9H3P7 528 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 PLSCR2Q9NRY7 297 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 INTS9Q9NV88 658 aaKnown RBP11.38□□□□□ -0.59
SSR4-205ENST00000447375 ATAD3AQ9NVI7 634 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 MARCOQ9UEW3 520 aaPredicted RBP11.38□□□□□ -0.59
SSR4-205ENST00000447375 Q9UFV3 132 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 MAPRE3Q9UPY8 281 aa11.38□□□□□ -0.59
SSR4-205ENST00000447375 CHCHD2Q9Y6H1 151 aaPredicted RBP11.38□□□□□ -0.59
SSR4-205ENST00000447375 NINQ8N4C6 2090 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 PINLYPA6NC86 204 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 TP53I11O14683 189 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 ANKRD28O15084 1053 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 COQ9O75208 318 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 NME6O75414 186 aaPredicted RBP11.37□□□□□ -0.59
SSR4-205ENST00000447375 ERN1O75460 977 aaKnown RBP11.37□□□□□ -0.59
SSR4-205ENST00000447375 P04436 131 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 ABCB1P08183 1280 aaPredicted RBP11.37□□□□□ -0.59
SSR4-205ENST00000447375 KITP10721 976 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 ACVR2AP27037 513 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 UQCRC1P31930 480 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 TMED10P49755 219 aaKnown RBP11.37□□□□□ -0.59
SSR4-205ENST00000447375 PSPHP78330 225 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 FOXO1Q12778 655 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 DAZAP2Q15038 168 aaPredicted RBP11.37□□□□□ -0.59
SSR4-205ENST00000447375 RPS6KA2Q15349 733 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 GXYLT1Q4G148 440 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 NUP54Q7Z3B4 507 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 MAVSQ7Z434 540 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 SPATA19Q7Z5L4 167 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 FBXW8Q8N3Y1 598 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 FAM13CQ8NE31 585 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 PSMA8Q8TAA3 256 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 LRRC8CQ8TDW0 803 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 HOXB13Q92826 284 aaPredicted RBP11.37□□□□□ -0.59
SSR4-205ENST00000447375 NTNG2Q96CW9 530 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 MAELQ96JY0 434 aaKnown RBP11.37□□□□□ -0.59
SSR4-205ENST00000447375 TTYH2Q9BSA4 534 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 BHLHE41Q9C0J9 482 aaPredicted RBP11.37□□□□□ -0.59
SSR4-205ENST00000447375 WDR55Q9H6Y2 383 aaPredicted RBP11.37□□□□□ -0.59
SSR4-205ENST00000447375 PLEKHF2Q9H8W4 249 aa11.37□□□□□ -0.59
SSR4-205ENST00000447375 FOLH1BQ9HBA9 442 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms