RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 TRPC4Q9UBN4 977 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 CLEC4EQ9ULY5 219 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 SESN1Q9Y6P5 492 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 USP34Q70CQ2 3546 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 A0A1B0GVI7 797 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 SOCS6O14544 535 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 ADAM12O43184 909 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 RNF13O43567 381 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 UBXN7O94888 489 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 DRD2P14416 443 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 GNSP15586 552 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 PDHA2P29803 388 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 ERVK-21P61565 698 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 SFXN4Q6P4A7 337 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 ARL9Q6T311 187 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 C6orf120Q7Z4R8 191 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 LRRTM4Q86VH4 590 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 CBARPQ8N350 705 aaPredicted RBP13.11□□□□□ -0.31
VPS52-212ENST00000445902 SIRT6Q8N6T7 355 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 RPLP0P6Q8NHW5 317 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 KLK6Q92876 244 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 YIPF5Q969M3 257 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 SLC38A2Q96QD8 506 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 YIPF4Q9BSR8 244 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 DMRT3Q9NQL9 472 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 CPNE7Q9UBL6 633 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 FBXL2Q9UKC9 423 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 POMT2Q9UKY4 750 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 OR51B4Q9Y5P0 310 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 STON1Q9Y6Q2 735 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 PRAMEF27A3QJZ7 478 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 SLC16A5O15375 505 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 TSPAN6O43657 245 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 RGS9O75916 674 aaPredicted RBP13.1□□□□□ -0.31
VPS52-212ENST00000445902 CXCL2P19875 107 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 SERPINA4P29622 427 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 CCND3P30281 292 aaPredicted RBP13.1□□□□□ -0.31
VPS52-212ENST00000445902 ERVFC1P60507 584 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 BAMBIQ13145 260 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 CRHR2Q13324 411 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 SLC25A30Q5SVS4 291 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 SMARCD3Q6STE5 483 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 TPRG1Q6ZUI0 275 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 PRICKLE2Q7Z3G6 844 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 OR4D9Q8NGE8 314 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 ADAMTS14Q8WXS8 1223 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 ACOT12Q8WYK0 555 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 UBL7Q96S82 380 aaPredicted RBP13.1□□□□□ -0.31
VPS52-212ENST00000445902 ORAI3Q9BRQ5 295 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 SARGQ9BW04 601 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 CWH43Q9H720 699 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 AUNIPQ9H7T9 357 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 TNFRSF10DQ9UBN6 386 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 CHURC1-FNTBB4DL54 471 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 ZNF197O14709 1029 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 CASC3O15234 703 aaKnown RBP13.1□□□□□ -0.31
VPS52-212ENST00000445902 TRIM23P36406 574 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 MMP12P39900 470 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 RFX3P48380 749 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 TBPL1P62380 186 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 ZNF33BQ06732 778 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 NHLRC3Q5JS37 347 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 ZNF322Q6U7Q0 402 aaPredicted RBP13.1□□□□□ -0.31
VPS52-212ENST00000445902 RTN4RL1Q86UN2 441 aaPredicted RBP13.1□□□□□ -0.31
VPS52-212ENST00000445902 MORN4Q8NDC4 146 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 TTLQ8NG68 377 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 EXOSC8Q96B26 276 aaKnown RBP13.1□□□□□ -0.31
VPS52-212ENST00000445902 MYNNQ9NPC7 610 aa13.1□□□□□ -0.31
VPS52-212ENST00000445902 MRPS18AQ9NVS2 196 aaKnown RBP13.1□□□□□ -0.31
VPS52-212ENST00000445902 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.09□□□□□ -0.31
VPS52-212ENST00000445902 A0A1W2PRQ8 180 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 FAM170BA6NMN3 283 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 TFP02787 698 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 PEPDP12955 493 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 NPR2P20594 1047 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 CTSOP43234 321 aaPredicted RBP13.09□□□□□ -0.31
VPS52-212ENST00000445902 GATMP50440 423 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 ARHGDIBP52566 201 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 SMIM11AP58511 58 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 GPR17Q13304 367 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 FZD5Q13467 585 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 SMAP2Q8WU79 429 aaPredicted RBP13.09□□□□□ -0.31
VPS52-212ENST00000445902 ECHDC3Q96DC8 303 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 ALG14Q96F25 216 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 ZNF607Q96SK3 696 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 GSDMCQ9BYG8 508 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 OR10A4Q9H209 315 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 ZDHHC6Q9H6R6 413 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 IGLV3-16A0A075B6K0 115 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 A0A087WUU8 490 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 IRGMA1A4Y4 181 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 L7N2F9 121 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 CHST10O43529 356 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 NDUFA2O43678 99 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 NR2F1P10589 423 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 SNRPBP14678 240 aaKnown RBP13.09□□□□□ -0.31
VPS52-212ENST00000445902 MAPK9P45984 424 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 VEGFCP49767 419 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 SMAD3P84022 425 aaKnown RBP13.09□□□□□ -0.31
VPS52-212ENST00000445902 SLC3A1Q07837 685 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms